Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCP4P48539 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PCP4P48539 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCP4P48539 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PCP4P48539 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.68□□□□□ -0.38
PCP4P48539 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCP4P48539 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCP4P48539 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PCP4P48539 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
PCP4P48539 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
PCP4P48539 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCP4P48539 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PCP4P48539 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCP4P48539 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCP4P48539 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCP4P48539 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
PCP4P48539 AC007614.4-201ENST00000564048 1827 ntBASIC12.67□□□□□ -0.38
PCP4P48539 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCP4P48539 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCP4P48539 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
PCP4P48539 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCP4P48539 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC12.67□□□□□ -0.38
PCP4P48539 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCP4P48539 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.67□□□□□ -0.38
PCP4P48539 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
PCP4P48539 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
PCP4P48539 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PCP4P48539 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.67□□□□□ -0.38
PCP4P48539 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCP4P48539 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCP4P48539 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PCP4P48539 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCP4P48539 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PCP4P48539 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
PCP4P48539 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC12.67□□□□□ -0.38
PCP4P48539 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC12.67□□□□□ -0.38
PCP4P48539 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC12.67□□□□□ -0.38
PCP4P48539 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCP4P48539 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.67□□□□□ -0.38
PCP4P48539 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.67□□□□□ -0.38
PCP4P48539 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.67□□□□□ -0.38
PCP4P48539 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCP4P48539 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
PCP4P48539 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
PCP4P48539 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
PCP4P48539 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC12.66□□□□□ -0.38
PCP4P48539 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.66□□□□□ -0.38
PCP4P48539 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.66□□□□□ -0.38
PCP4P48539 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
PCP4P48539 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
PCP4P48539 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
PCP4P48539 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
PCP4P48539 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.66□□□□□ -0.38
PCP4P48539 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
PCP4P48539 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.66□□□□□ -0.38
PCP4P48539 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.66□□□□□ -0.38
PCP4P48539 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
PCP4P48539 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.66□□□□□ -0.38
PCP4P48539 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
PCP4P48539 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
PCP4P48539 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.66□□□□□ -0.38
PCP4P48539 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.66□□□□□ -0.38
PCP4P48539 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
PCP4P48539 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.66□□□□□ -0.38
PCP4P48539 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.66□□□□□ -0.38
PCP4P48539 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC12.66□□□□□ -0.38
PCP4P48539 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCP4P48539 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC12.65□□□□□ -0.38
PCP4P48539 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC12.65□□□□□ -0.38
PCP4P48539 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.65□□□□□ -0.38
PCP4P48539 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.65□□□□□ -0.38
PCP4P48539 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCP4P48539 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms