Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A12P48065 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A12P48065 AC097493.4-201ENST00000641197 219 ntBASIC17.77■□□□□ 0.44
SLC6A12P48065 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A12P48065 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC6A12P48065 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC6A12P48065 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.77■□□□□ 0.43
SLC6A12P48065 AL096828.2-201ENST00000567259 1965 ntBASIC17.77■□□□□ 0.43
SLC6A12P48065 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SLC6A12P48065 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SLC6A12P48065 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.77■□□□□ 0.43
SLC6A12P48065 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.77■□□□□ 0.43
SLC6A12P48065 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A12P48065 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A12P48065 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A12P48065 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SLC6A12P48065 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A12P48065 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A12P48065 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A12P48065 AL024508.2-201ENST00000607749 1894 ntBASIC17.76■□□□□ 0.43
SLC6A12P48065 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
SLC6A12P48065 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC6A12P48065 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC6A12P48065 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A12P48065 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SLC6A12P48065 AP000523.1-201ENST00000398242 1049 ntBASIC17.76■□□□□ 0.43
SLC6A12P48065 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
SLC6A12P48065 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC6A12P48065 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.76■□□□□ 0.43
SLC6A12P48065 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A12P48065 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A12P48065 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC6A12P48065 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A12P48065 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC6A12P48065 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A12P48065 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC6A12P48065 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC6A12P48065 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC6A12P48065 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A12P48065 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A12P48065 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC6A12P48065 REXO1L9P-201ENST00000604264 2108 ntBASIC17.75■□□□□ 0.43
SLC6A12P48065 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A12P48065 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC6A12P48065 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A12P48065 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC6A12P48065 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SLC6A12P48065 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SLC6A12P48065 NOC2LP2-201ENST00000407594 1944 ntBASIC17.75■□□□□ 0.43
SLC6A12P48065 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A12P48065 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A12P48065 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC6A12P48065 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC6A12P48065 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC6A12P48065 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A12P48065 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC6A12P48065 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC6A12P48065 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SLC6A12P48065 AC010203.1-204ENST00000548782 407 ntBASIC17.75■□□□□ 0.43
SLC6A12P48065 AC133561.5-201ENST00000635547 218 ntBASIC17.75■□□□□ 0.43
SLC6A12P48065 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SLC6A12P48065 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A12P48065 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A12P48065 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SLC6A12P48065 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A12P48065 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC6A12P48065 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A12P48065 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC6A12P48065 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A12P48065 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SLC6A12P48065 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A12P48065 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SLC6A12P48065 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SLC6A12P48065 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A12P48065 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC6A12P48065 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A12P48065 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SLC6A12P48065 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A12P48065 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
SLC6A12P48065 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SLC6A12P48065 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC6A12P48065 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
SLC6A12P48065 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SLC6A12P48065 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC6A12P48065 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A12P48065 AIRN-201ENST00000601203 4374 ntBASIC17.74■□□□□ 0.43
SLC6A12P48065 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A12P48065 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A12P48065 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC6A12P48065 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A12P48065 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A12P48065 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A12P48065 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC6A12P48065 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC6A12P48065 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
SLC6A12P48065 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms