Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HADHAP40939 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.65■□□□□ 0.58
HADHAP40939 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.65■□□□□ 0.58
HADHAP40939 AL512604.3-201ENST00000569583 964 ntBASIC18.65■□□□□ 0.58
HADHAP40939 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
HADHAP40939 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.65■□□□□ 0.58
HADHAP40939 MIR4674-201ENST00000582457 87 ntBASIC18.65■□□□□ 0.58
HADHAP40939 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HADHAP40939 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HADHAP40939 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
HADHAP40939 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HADHAP40939 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HADHAP40939 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HADHAP40939 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HADHAP40939 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HADHAP40939 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HADHAP40939 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HADHAP40939 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HADHAP40939 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
HADHAP40939 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.65■□□□□ 0.58
HADHAP40939 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HADHAP40939 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.65■□□□□ 0.58
HADHAP40939 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HADHAP40939 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
HADHAP40939 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.64■□□□□ 0.57
HADHAP40939 AC034236.2-201ENST00000606662 1610 ntBASIC18.64■□□□□ 0.57
HADHAP40939 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HADHAP40939 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HADHAP40939 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.64■□□□□ 0.57
HADHAP40939 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HADHAP40939 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HADHAP40939 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.64■□□□□ 0.57
HADHAP40939 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.64■□□□□ 0.57
HADHAP40939 LINC01023-201ENST00000606054 436 ntBASIC18.64■□□□□ 0.57
HADHAP40939 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HADHAP40939 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
HADHAP40939 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HADHAP40939 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HADHAP40939 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HADHAP40939 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HADHAP40939 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HADHAP40939 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HADHAP40939 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.64■□□□□ 0.57
HADHAP40939 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HADHAP40939 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
HADHAP40939 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HADHAP40939 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HADHAP40939 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
HADHAP40939 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HADHAP40939 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HADHAP40939 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HADHAP40939 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HADHAP40939 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HADHAP40939 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HADHAP40939 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HADHAP40939 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HADHAP40939 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.63■□□□□ 0.57
HADHAP40939 KRT18P41-201ENST00000518924 1277 ntBASIC18.63■□□□□ 0.57
HADHAP40939 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HADHAP40939 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.63■□□□□ 0.57
HADHAP40939 WWOX-216ENST00000569818 525 ntBASIC18.63■□□□□ 0.57
HADHAP40939 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HADHAP40939 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HADHAP40939 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HADHAP40939 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.63■□□□□ 0.57
HADHAP40939 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
HADHAP40939 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HADHAP40939 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
HADHAP40939 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HADHAP40939 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
HADHAP40939 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HADHAP40939 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.62■□□□□ 0.57
HADHAP40939 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.62■□□□□ 0.57
HADHAP40939 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HADHAP40939 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HADHAP40939 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HADHAP40939 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HADHAP40939 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HADHAP40939 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HADHAP40939 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.62■□□□□ 0.57
HADHAP40939 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HADHAP40939 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HADHAP40939 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HADHAP40939 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HADHAP40939 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HADHAP40939 AC211429.1-201ENST00000415277 523 ntBASIC18.62■□□□□ 0.57
HADHAP40939 AC087499.1-201ENST00000418141 1075 ntBASIC18.62■□□□□ 0.57
HADHAP40939 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.62■□□□□ 0.57
HADHAP40939 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
HADHAP40939 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.62■□□□□ 0.57
HADHAP40939 KRT18P22-201ENST00000402024 1347 ntBASIC18.62■□□□□ 0.57
HADHAP40939 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HADHAP40939 LINC01568-207ENST00000641790 1380 ntBASIC18.62■□□□□ 0.57
HADHAP40939 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HADHAP40939 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HADHAP40939 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HADHAP40939 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
HADHAP40939 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HADHAP40939 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HADHAP40939 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms