Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COPB2P35606 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COPB2P35606 MINOS1P3-201ENST00000457048 203 ntBASIC21.01■□□□□ 0.95
COPB2P35606 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.01■□□□□ 0.95
COPB2P35606 AP002469.2-201ENST00000531724 424 ntBASIC21.01■□□□□ 0.95
COPB2P35606 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COPB2P35606 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.01■□□□□ 0.95
COPB2P35606 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COPB2P35606 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.01■□□□□ 0.95
COPB2P35606 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COPB2P35606 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
COPB2P35606 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
COPB2P35606 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COPB2P35606 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COPB2P35606 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COPB2P35606 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
COPB2P35606 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
COPB2P35606 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.01■□□□□ 0.95
COPB2P35606 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
COPB2P35606 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
COPB2P35606 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COPB2P35606 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
COPB2P35606 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COPB2P35606 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
COPB2P35606 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
COPB2P35606 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COPB2P35606 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
COPB2P35606 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
COPB2P35606 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21■□□□□ 0.95
COPB2P35606 SAPCD2P3-201ENST00000455031 850 ntBASIC21■□□□□ 0.95
COPB2P35606 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
COPB2P35606 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COPB2P35606 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
COPB2P35606 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21■□□□□ 0.95
COPB2P35606 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
COPB2P35606 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21■□□□□ 0.95
COPB2P35606 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21■□□□□ 0.95
COPB2P35606 AC004263.2-201ENST00000617183 678 ntBASIC21■□□□□ 0.95
COPB2P35606 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21■□□□□ 0.95
COPB2P35606 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
COPB2P35606 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21■□□□□ 0.95
COPB2P35606 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COPB2P35606 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COPB2P35606 AC009102.3-201ENST00000623118 1491 ntBASIC21■□□□□ 0.95
COPB2P35606 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
COPB2P35606 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COPB2P35606 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COPB2P35606 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COPB2P35606 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
COPB2P35606 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COPB2P35606 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.99■□□□□ 0.95
COPB2P35606 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
COPB2P35606 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
COPB2P35606 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.99■□□□□ 0.95
COPB2P35606 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COPB2P35606 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COPB2P35606 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.99■□□□□ 0.95
COPB2P35606 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.99■□□□□ 0.95
COPB2P35606 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.99■□□□□ 0.95
COPB2P35606 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.99■□□□□ 0.95
COPB2P35606 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
COPB2P35606 AP005901.3-202ENST00000581653 237 ntBASIC20.99■□□□□ 0.95
COPB2P35606 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.99■□□□□ 0.95
COPB2P35606 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.99■□□□□ 0.95
COPB2P35606 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COPB2P35606 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COPB2P35606 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COPB2P35606 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
COPB2P35606 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COPB2P35606 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COPB2P35606 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.98■□□□□ 0.95
COPB2P35606 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COPB2P35606 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.98■□□□□ 0.95
COPB2P35606 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
COPB2P35606 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPB2P35606 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
COPB2P35606 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPB2P35606 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COPB2P35606 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
COPB2P35606 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.98■□□□□ 0.95
COPB2P35606 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPB2P35606 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPB2P35606 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPB2P35606 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COPB2P35606 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.98■□□□□ 0.95
COPB2P35606 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.98■□□□□ 0.95
COPB2P35606 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COPB2P35606 REXO1L6P-202ENST00000619970 1078 ntBASIC20.98■□□□□ 0.95
COPB2P35606 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPB2P35606 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
COPB2P35606 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPB2P35606 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPB2P35606 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
COPB2P35606 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COPB2P35606 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COPB2P35606 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.97■□□□□ 0.95
COPB2P35606 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
COPB2P35606 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPB2P35606 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.97■□□□□ 0.95
COPB2P35606 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms