Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
NFKB1P19838 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NFKB1P19838 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
NFKB1P19838 AC093677.2-201ENST00000600169 1863 ntBASIC18.73■□□□□ 0.59
NFKB1P19838 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NFKB1P19838 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NFKB1P19838 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
NFKB1P19838 AC009102.3-201ENST00000623118 1491 ntBASIC18.73■□□□□ 0.59
NFKB1P19838 SDHAP2-201ENST00000455183 2001 ntBASIC18.73■□□□□ 0.59
NFKB1P19838 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NFKB1P19838 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.73■□□□□ 0.59
NFKB1P19838 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.73■□□□□ 0.59
NFKB1P19838 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.73■□□□□ 0.59
NFKB1P19838 MIR149-201ENST00000384879 89 ntBASIC18.73■□□□□ 0.59
NFKB1P19838 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.73■□□□□ 0.59
NFKB1P19838 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.73■□□□□ 0.59
NFKB1P19838 AC104390.1-201ENST00000555663 520 ntBASIC18.73■□□□□ 0.59
NFKB1P19838 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.73■□□□□ 0.59
NFKB1P19838 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.73■□□□□ 0.59
NFKB1P19838 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.73■□□□□ 0.59
NFKB1P19838 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NFKB1P19838 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.73■□□□□ 0.59
NFKB1P19838 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.73■□□□□ 0.59
NFKB1P19838 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.73■□□□□ 0.59
NFKB1P19838 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.73■□□□□ 0.59
NFKB1P19838 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.73■□□□□ 0.59
NFKB1P19838 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NFKB1P19838 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.73■□□□□ 0.59
NFKB1P19838 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NFKB1P19838 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.73■□□□□ 0.59
NFKB1P19838 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.73■□□□□ 0.59
NFKB1P19838 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NFKB1P19838 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKB1P19838 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NFKB1P19838 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKB1P19838 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKB1P19838 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NFKB1P19838 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKB1P19838 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NFKB1P19838 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NFKB1P19838 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NFKB1P19838 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKB1P19838 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NFKB1P19838 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NFKB1P19838 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKB1P19838 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.72■□□□□ 0.59
NFKB1P19838 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKB1P19838 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
NFKB1P19838 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.72■□□□□ 0.59
NFKB1P19838 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.72■□□□□ 0.59
NFKB1P19838 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.72■□□□□ 0.59
NFKB1P19838 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.72■□□□□ 0.59
NFKB1P19838 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.72■□□□□ 0.59
NFKB1P19838 AL512604.3-201ENST00000569583 964 ntBASIC18.72■□□□□ 0.59
NFKB1P19838 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.72■□□□□ 0.59
NFKB1P19838 AC024243.1-201ENST00000609234 778 ntBASIC18.72■□□□□ 0.59
NFKB1P19838 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.72■□□□□ 0.59
NFKB1P19838 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
NFKB1P19838 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKB1P19838 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NFKB1P19838 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NFKB1P19838 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NFKB1P19838 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NFKB1P19838 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
NFKB1P19838 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKB1P19838 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKB1P19838 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NFKB1P19838 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKB1P19838 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NFKB1P19838 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NFKB1P19838 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NFKB1P19838 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
NFKB1P19838 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.71■□□□□ 0.59
NFKB1P19838 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKB1P19838 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.71■□□□□ 0.59
NFKB1P19838 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKB1P19838 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NFKB1P19838 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
NFKB1P19838 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKB1P19838 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKB1P19838 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.71■□□□□ 0.59
NFKB1P19838 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKB1P19838 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.71■□□□□ 0.59
NFKB1P19838 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKB1P19838 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKB1P19838 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NFKB1P19838 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKB1P19838 ECEL1P3-201ENST00000427961 737 ntBASIC18.71■□□□□ 0.59
NFKB1P19838 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.71■□□□□ 0.59
NFKB1P19838 SLC25A3P1-201ENST00000443844 931 ntBASIC18.71■□□□□ 0.59
NFKB1P19838 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.71■□□□□ 0.59
NFKB1P19838 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.71■□□□□ 0.59
NFKB1P19838 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.71■□□□□ 0.59
NFKB1P19838 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NFKB1P19838 AC073912.3-201ENST00000624414 853 ntBASIC18.71■□□□□ 0.59
NFKB1P19838 AC133561.5-201ENST00000635547 218 ntBASIC18.71■□□□□ 0.59
NFKB1P19838 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKB1P19838 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKB1P19838 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKB1P19838 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms