Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.19■□□□□ 0.18
ATF1P18846 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATF1P18846 AC004980.1-204ENST00000429707 299 ntBASIC16.19■□□□□ 0.18
ATF1P18846 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
ATF1P18846 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.19■□□□□ 0.18
ATF1P18846 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.19■□□□□ 0.18
ATF1P18846 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.19■□□□□ 0.18
ATF1P18846 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATF1P18846 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.19■□□□□ 0.18
ATF1P18846 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.19■□□□□ 0.18
ATF1P18846 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.19■□□□□ 0.18
ATF1P18846 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.19■□□□□ 0.18
ATF1P18846 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATF1P18846 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATF1P18846 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATF1P18846 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATF1P18846 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ATF1P18846 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATF1P18846 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.19■□□□□ 0.18
ATF1P18846 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATF1P18846 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATF1P18846 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ATF1P18846 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
ATF1P18846 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATF1P18846 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.18■□□□□ 0.18
ATF1P18846 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATF1P18846 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ATF1P18846 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATF1P18846 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF1P18846 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.18■□□□□ 0.18
ATF1P18846 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF1P18846 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ATF1P18846 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.18■□□□□ 0.18
ATF1P18846 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.18■□□□□ 0.18
ATF1P18846 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ATF1P18846 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ATF1P18846 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF1P18846 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF1P18846 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.18■□□□□ 0.18
ATF1P18846 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.18■□□□□ 0.18
ATF1P18846 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF1P18846 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF1P18846 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF1P18846 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.18■□□□□ 0.18
ATF1P18846 AC112777.1-201ENST00000540175 1423 ntBASIC16.18■□□□□ 0.18
ATF1P18846 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF1P18846 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF1P18846 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATF1P18846 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF1P18846 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.18■□□□□ 0.18
ATF1P18846 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.18■□□□□ 0.18
ATF1P18846 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.18■□□□□ 0.18
ATF1P18846 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATF1P18846 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.18■□□□□ 0.18
ATF1P18846 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF1P18846 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF1P18846 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATF1P18846 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF1P18846 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF1P18846 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
ATF1P18846 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
ATF1P18846 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
ATF1P18846 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF1P18846 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
ATF1P18846 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ATF1P18846 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ATF1P18846 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATF1P18846 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.17■□□□□ 0.18
ATF1P18846 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF1P18846 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF1P18846 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF1P18846 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF1P18846 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF1P18846 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF1P18846 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATF1P18846 AP002982.1-201ENST00000492365 877 ntBASIC16.17■□□□□ 0.18
ATF1P18846 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.17■□□□□ 0.18
ATF1P18846 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.17■□□□□ 0.18
ATF1P18846 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
ATF1P18846 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.17■□□□□ 0.18
ATF1P18846 AC073648.6-201ENST00000641589 218 ntBASIC16.17■□□□□ 0.18
ATF1P18846 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ATF1P18846 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ATF1P18846 AC008556.1-201ENST00000610908 2040 ntBASIC16.17■□□□□ 0.18
ATF1P18846 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATF1P18846 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF1P18846 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF1P18846 KRT8P45-201ENST00000414328 1447 ntBASIC16.17■□□□□ 0.18
ATF1P18846 KRT8P3-201ENST00000519669 1449 ntBASIC16.17■□□□□ 0.18
ATF1P18846 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.17■□□□□ 0.18
ATF1P18846 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF1P18846 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.17■□□□□ 0.18
ATF1P18846 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
ATF1P18846 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATF1P18846 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.17■□□□□ 0.18
ATF1P18846 HTR7P1-201ENST00000538670 1336 ntBASIC16.17■□□□□ 0.18
ATF1P18846 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.17■□□□□ 0.18
ATF1P18846 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF1P18846 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATF1P18846 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms