Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.47■□□□□ 0.71
PTPN1P18031 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPN1P18031 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN1P18031 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.47■□□□□ 0.71
PTPN1P18031 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN1P18031 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PTPN1P18031 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN1P18031 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.47■□□□□ 0.71
PTPN1P18031 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN1P18031 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPN1P18031 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN1P18031 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN1P18031 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN1P18031 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
PTPN1P18031 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN1P18031 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPN1P18031 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN1P18031 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PTPN1P18031 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN1P18031 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN1P18031 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN1P18031 KRT18P48-201ENST00000434763 852 ntBASIC19.46■□□□□ 0.71
PTPN1P18031 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN1P18031 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PTPN1P18031 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.46■□□□□ 0.71
PTPN1P18031 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
PTPN1P18031 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPN1P18031 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPN1P18031 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN1P18031 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
PTPN1P18031 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN1P18031 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN1P18031 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PTPN1P18031 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN1P18031 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN1P18031 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN1P18031 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN1P18031 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPN1P18031 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN1P18031 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN1P18031 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN1P18031 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PTPN1P18031 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN1P18031 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN1P18031 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN1P18031 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN1P18031 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPN1P18031 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN1P18031 AP003733.1-201ENST00000491725 852 ntBASIC19.45■□□□□ 0.7
PTPN1P18031 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.45■□□□□ 0.7
PTPN1P18031 RNF126P1-202ENST00000569893 925 ntBASIC19.45■□□□□ 0.7
PTPN1P18031 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.45■□□□□ 0.7
PTPN1P18031 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPN1P18031 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPN1P18031 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PTPN1P18031 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN1P18031 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
PTPN1P18031 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.45■□□□□ 0.7
PTPN1P18031 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN1P18031 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN1P18031 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN1P18031 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN1P18031 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
PTPN1P18031 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN1P18031 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN1P18031 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PTPN1P18031 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN1P18031 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN1P18031 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN1P18031 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN1P18031 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN1P18031 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN1P18031 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN1P18031 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
PTPN1P18031 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN1P18031 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN1P18031 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PTPN1P18031 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PTPN1P18031 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.44■□□□□ 0.7
PTPN1P18031 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.44■□□□□ 0.7
PTPN1P18031 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PTPN1P18031 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN1P18031 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN1P18031 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN1P18031 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.44■□□□□ 0.7
PTPN1P18031 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN1P18031 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.44■□□□□ 0.7
PTPN1P18031 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN1P18031 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN1P18031 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN1P18031 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN1P18031 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN1P18031 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PTPN1P18031 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
PTPN1P18031 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN1P18031 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN1P18031 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN1P18031 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN1P18031 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.43■□□□□ 0.7
PTPN1P18031 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms