Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A2P16615 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.32■□□□□ 0.84
ATP2A2P16615 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.32■□□□□ 0.84
ATP2A2P16615 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A2P16615 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A2P16615 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A2P16615 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A2P16615 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A2P16615 AC233702.3-201ENST00000578656 1387 ntBASIC20.32■□□□□ 0.84
ATP2A2P16615 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A2P16615 AC120498.9-201ENST00000339021 3867 ntBASIC20.31■□□□□ 0.84
ATP2A2P16615 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A2P16615 ZNF815P-204ENST00000434898 1737 ntBASIC20.31■□□□□ 0.84
ATP2A2P16615 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A2P16615 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A2P16615 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A2P16615 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A2P16615 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A2P16615 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A2P16615 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A2P16615 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.31■□□□□ 0.84
ATP2A2P16615 AC005332.3-201ENST00000589904 676 ntBASIC20.31■□□□□ 0.84
ATP2A2P16615 Z69720.1-201ENST00000601483 472 ntBASIC20.31■□□□□ 0.84
ATP2A2P16615 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.31■□□□□ 0.84
ATP2A2P16615 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
ATP2A2P16615 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
ATP2A2P16615 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.31■□□□□ 0.84
ATP2A2P16615 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A2P16615 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
ATP2A2P16615 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A2P16615 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A2P16615 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A2P16615 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A2P16615 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ATP2A2P16615 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A2P16615 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A2P16615 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A2P16615 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP2A2P16615 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP2A2P16615 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A2P16615 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP2A2P16615 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.3■□□□□ 0.84
ATP2A2P16615 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A2P16615 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A2P16615 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A2P16615 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A2P16615 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP2A2P16615 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A2P16615 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP2A2P16615 AF228730.7-201ENST00000641842 219 ntBASIC20.3■□□□□ 0.84
ATP2A2P16615 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.3■□□□□ 0.84
ATP2A2P16615 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
ATP2A2P16615 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A2P16615 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A2P16615 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP2A2P16615 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
ATP2A2P16615 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A2P16615 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A2P16615 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ATP2A2P16615 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
ATP2A2P16615 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A2P16615 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A2P16615 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ATP2A2P16615 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A2P16615 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
ATP2A2P16615 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ATP2A2P16615 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.29■□□□□ 0.84
ATP2A2P16615 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.29■□□□□ 0.84
ATP2A2P16615 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ATP2A2P16615 AP003733.1-201ENST00000491725 852 ntBASIC20.29■□□□□ 0.84
ATP2A2P16615 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A2P16615 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.29■□□□□ 0.84
ATP2A2P16615 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.29■□□□□ 0.84
ATP2A2P16615 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
ATP2A2P16615 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.29■□□□□ 0.84
ATP2A2P16615 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.29■□□□□ 0.84
ATP2A2P16615 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.29■□□□□ 0.84
ATP2A2P16615 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A2P16615 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A2P16615 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.29■□□□□ 0.84
ATP2A2P16615 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ATP2A2P16615 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A2P16615 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A2P16615 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.29■□□□□ 0.84
ATP2A2P16615 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A2P16615 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.29■□□□□ 0.84
ATP2A2P16615 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A2P16615 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A2P16615 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ATP2A2P16615 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A2P16615 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A2P16615 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A2P16615 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A2P16615 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.28■□□□□ 0.84
ATP2A2P16615 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A2P16615 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A2P16615 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.28■□□□□ 0.84
ATP2A2P16615 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A2P16615 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A2P16615 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms