Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
COL11A2P13942 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
COL11A2P13942 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC22.45■■□□□ 1.19
COL11A2P13942 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC22.45■■□□□ 1.19
COL11A2P13942 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC22.45■■□□□ 1.19
COL11A2P13942 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC22.45■■□□□ 1.19
COL11A2P13942 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC22.45■■□□□ 1.19
COL11A2P13942 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
COL11A2P13942 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
COL11A2P13942 SDHAP2-201ENST00000455183 2001 ntBASIC22.45■■□□□ 1.19
COL11A2P13942 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL11A2P13942 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL11A2P13942 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC22.45■■□□□ 1.18
COL11A2P13942 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL11A2P13942 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.45■■□□□ 1.18
COL11A2P13942 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL11A2P13942 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL11A2P13942 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC22.45■■□□□ 1.18
COL11A2P13942 IMP4-203ENST00000409935 958 ntTSL 5 BASIC22.45■■□□□ 1.18
COL11A2P13942 MTCL1P1-201ENST00000446207 792 ntBASIC22.45■■□□□ 1.18
COL11A2P13942 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC22.45■■□□□ 1.18
COL11A2P13942 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC22.45■■□□□ 1.18
COL11A2P13942 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC22.45■■□□□ 1.18
COL11A2P13942 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC22.45■■□□□ 1.18
COL11A2P13942 AC107918.4-202ENST00000641623 219 ntBASIC22.45■■□□□ 1.18
COL11A2P13942 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL11A2P13942 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL11A2P13942 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL11A2P13942 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
COL11A2P13942 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL11A2P13942 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL11A2P13942 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL11A2P13942 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC22.44■■□□□ 1.18
COL11A2P13942 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL11A2P13942 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC22.44■■□□□ 1.18
COL11A2P13942 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC22.44■■□□□ 1.18
COL11A2P13942 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
COL11A2P13942 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.44■■□□□ 1.18
COL11A2P13942 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
COL11A2P13942 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL11A2P13942 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.44■■□□□ 1.18
COL11A2P13942 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL11A2P13942 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL11A2P13942 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL11A2P13942 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL11A2P13942 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
COL11A2P13942 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.44■■□□□ 1.18
COL11A2P13942 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.43■■□□□ 1.18
COL11A2P13942 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A2P13942 UNC93B6-202ENST00000528242 690 ntBASIC22.43■■□□□ 1.18
COL11A2P13942 AC134684.3-201ENST00000641758 218 ntBASIC22.43■■□□□ 1.18
COL11A2P13942 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
COL11A2P13942 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A2P13942 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A2P13942 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A2P13942 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
COL11A2P13942 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.43■■□□□ 1.18
COL11A2P13942 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A2P13942 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A2P13942 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.43■■□□□ 1.18
COL11A2P13942 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A2P13942 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A2P13942 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
COL11A2P13942 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC22.43■■□□□ 1.18
COL11A2P13942 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A2P13942 FUOM-202ENST00000368551 628 ntTSL 3 BASIC22.43■■□□□ 1.18
COL11A2P13942 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A2P13942 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC22.43■■□□□ 1.18
COL11A2P13942 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC22.43■■□□□ 1.18
COL11A2P13942 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC22.43■■□□□ 1.18
COL11A2P13942 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A2P13942 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC22.43■■□□□ 1.18
COL11A2P13942 AC002347.1-201ENST00000569543 541 ntBASIC22.43■■□□□ 1.18
COL11A2P13942 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL11A2P13942 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL11A2P13942 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
COL11A2P13942 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL11A2P13942 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC22.42■■□□□ 1.18
COL11A2P13942 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC22.42■■□□□ 1.18
COL11A2P13942 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL11A2P13942 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL11A2P13942 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL11A2P13942 RPS2P28-201ENST00000314255 741 ntBASIC22.42■■□□□ 1.18
COL11A2P13942 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
COL11A2P13942 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
COL11A2P13942 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC22.42■■□□□ 1.18
COL11A2P13942 DNAJB3-201ENST00000446806 729 ntBASIC22.42■■□□□ 1.18
COL11A2P13942 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC22.42■■□□□ 1.18
COL11A2P13942 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC22.42■■□□□ 1.18
COL11A2P13942 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL11A2P13942 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
COL11A2P13942 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL11A2P13942 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL11A2P13942 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL11A2P13942 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL11A2P13942 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.41■■□□□ 1.18
COL11A2P13942 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC22.41■■□□□ 1.18
COL11A2P13942 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL11A2P13942 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL11A2P13942 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms