Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CFTRP13569 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC31.43■■■□□ 2.62
CFTRP13569 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC31.43■■■□□ 2.62
CFTRP13569 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
CFTRP13569 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CFTRP13569 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CFTRP13569 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC31.43■■■□□ 2.62
CFTRP13569 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC31.43■■■□□ 2.62
CFTRP13569 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CFTRP13569 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC31.42■■■□□ 2.62
CFTRP13569 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CFTRP13569 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CFTRP13569 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
CFTRP13569 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
CFTRP13569 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
CFTRP13569 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC31.42■■■□□ 2.62
CFTRP13569 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC31.42■■■□□ 2.62
CFTRP13569 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CFTRP13569 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
CFTRP13569 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC31.42■■■□□ 2.62
CFTRP13569 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CFTRP13569 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
CFTRP13569 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CFTRP13569 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CFTRP13569 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CFTRP13569 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC31.42■■■□□ 2.62
CFTRP13569 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
CFTRP13569 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CFTRP13569 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CFTRP13569 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC31.41■■■□□ 2.62
CFTRP13569 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CFTRP13569 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CFTRP13569 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CFTRP13569 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CFTRP13569 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
CFTRP13569 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC31.41■■■□□ 2.62
CFTRP13569 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CFTRP13569 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
CFTRP13569 COX5A-206ENST00000568783 571 ntTSL 3 BASIC31.41■■■□□ 2.62
CFTRP13569 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CFTRP13569 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
CFTRP13569 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC31.41■■■□□ 2.62
CFTRP13569 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
CFTRP13569 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
CFTRP13569 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CFTRP13569 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC31.41■■■□□ 2.62
CFTRP13569 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CFTRP13569 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CFTRP13569 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CFTRP13569 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
CFTRP13569 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC31.4■■■□□ 2.62
CFTRP13569 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC31.4■■■□□ 2.62
CFTRP13569 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CFTRP13569 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CFTRP13569 AC079776.2-201ENST00000641154 1609 ntBASIC31.4■■■□□ 2.62
CFTRP13569 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CFTRP13569 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CFTRP13569 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CFTRP13569 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC31.4■■■□□ 2.62
CFTRP13569 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC31.4■■■□□ 2.62
CFTRP13569 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC31.4■■■□□ 2.62
CFTRP13569 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CFTRP13569 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC31.39■■■□□ 2.62
CFTRP13569 KRT18P28-201ENST00000453838 1332 ntBASIC31.39■■■□□ 2.62
CFTRP13569 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
CFTRP13569 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
CFTRP13569 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CFTRP13569 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CFTRP13569 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CFTRP13569 KRT18P65-201ENST00000439811 1286 ntBASIC31.39■■■□□ 2.62
CFTRP13569 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC31.39■■■□□ 2.62
CFTRP13569 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC31.39■■■□□ 2.62
CFTRP13569 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC31.39■■■□□ 2.62
CFTRP13569 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC31.39■■■□□ 2.61
CFTRP13569 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.61
CFTRP13569 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CFTRP13569 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
CFTRP13569 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC31.38■■■□□ 2.61
CFTRP13569 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC31.38■■■□□ 2.61
CFTRP13569 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
CFTRP13569 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CFTRP13569 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CFTRP13569 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC31.38■■■□□ 2.61
CFTRP13569 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC31.38■■■□□ 2.61
CFTRP13569 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
CFTRP13569 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC31.38■■■□□ 2.61
CFTRP13569 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CFTRP13569 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC31.38■■■□□ 2.61
CFTRP13569 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CFTRP13569 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC31.37■■■□□ 2.61
CFTRP13569 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC31.37■■■□□ 2.61
CFTRP13569 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CFTRP13569 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
CFTRP13569 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC31.37■■■□□ 2.61
CFTRP13569 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC31.37■■■□□ 2.61
CFTRP13569 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CFTRP13569 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC31.37■■■□□ 2.61
CFTRP13569 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC31.37■■■□□ 2.61
CFTRP13569 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC31.37■■■□□ 2.61
CFTRP13569 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms