Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TOP1P11387 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
TOP1P11387 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TOP1P11387 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.63■■□□□ 1.05
TOP1P11387 IER3-202ENST00000376377 1350 ntBASIC21.62■■□□□ 1.05
TOP1P11387 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.62■■□□□ 1.05
TOP1P11387 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TOP1P11387 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TOP1P11387 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TOP1P11387 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TOP1P11387 PVRIG2P-201ENST00000435460 978 ntBASIC21.62■■□□□ 1.05
TOP1P11387 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TOP1P11387 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.62■■□□□ 1.05
TOP1P11387 AC009065.1-201ENST00000564055 1225 ntBASIC21.62■■□□□ 1.05
TOP1P11387 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
TOP1P11387 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.62■■□□□ 1.05
TOP1P11387 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.62■■□□□ 1.05
TOP1P11387 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TOP1P11387 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TOP1P11387 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TOP1P11387 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TOP1P11387 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
TOP1P11387 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.61■■□□□ 1.05
TOP1P11387 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TOP1P11387 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
TOP1P11387 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TOP1P11387 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TOP1P11387 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
TOP1P11387 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.61■■□□□ 1.05
TOP1P11387 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
TOP1P11387 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.61■■□□□ 1.05
TOP1P11387 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.61■■□□□ 1.05
TOP1P11387 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
TOP1P11387 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.61■■□□□ 1.05
TOP1P11387 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.61■■□□□ 1.05
TOP1P11387 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TOP1P11387 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.61■■□□□ 1.05
TOP1P11387 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
TOP1P11387 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TOP1P11387 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TOP1P11387 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TOP1P11387 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TOP1P11387 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.61■■□□□ 1.05
TOP1P11387 AC093525.10-201ENST00000625130 1569 ntBASIC21.61■■□□□ 1.05
TOP1P11387 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
TOP1P11387 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
TOP1P11387 AL163051.1-201ENST00000569214 1512 ntBASIC21.6■■□□□ 1.05
TOP1P11387 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TOP1P11387 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.6■■□□□ 1.05
TOP1P11387 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.6■■□□□ 1.05
TOP1P11387 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TOP1P11387 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
TOP1P11387 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.6■■□□□ 1.05
TOP1P11387 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TOP1P11387 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TOP1P11387 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.6■■□□□ 1.05
TOP1P11387 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.6■■□□□ 1.05
TOP1P11387 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.6■■□□□ 1.05
TOP1P11387 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TOP1P11387 AC112777.1-201ENST00000540175 1423 ntBASIC21.6■■□□□ 1.05
TOP1P11387 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TOP1P11387 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.6■■□□□ 1.05
TOP1P11387 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.6■■□□□ 1.05
TOP1P11387 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TOP1P11387 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TOP1P11387 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TOP1P11387 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.59■■□□□ 1.05
TOP1P11387 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TOP1P11387 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TOP1P11387 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
TOP1P11387 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.59■■□□□ 1.05
TOP1P11387 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TOP1P11387 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TOP1P11387 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
TOP1P11387 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TOP1P11387 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TOP1P11387 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
TOP1P11387 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TOP1P11387 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TOP1P11387 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TOP1P11387 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TOP1P11387 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.59■■□□□ 1.05
TOP1P11387 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TOP1P11387 AL645929.1-201ENST00000420084 975 ntBASIC21.59■■□□□ 1.05
TOP1P11387 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TOP1P11387 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TOP1P11387 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.59■■□□□ 1.05
TOP1P11387 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.59■■□□□ 1.05
TOP1P11387 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.59■■□□□ 1.05
TOP1P11387 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
TOP1P11387 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TOP1P11387 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.59■■□□□ 1.05
TOP1P11387 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
TOP1P11387 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TOP1P11387 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
TOP1P11387 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.58■■□□□ 1.05
TOP1P11387 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
TOP1P11387 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TOP1P11387 AL138781.2-201ENST00000617896 1843 ntBASIC21.58■■□□□ 1.05
TOP1P11387 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms