Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.24■□□□□ 0.35
OPN1SWP03999 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
OPN1SWP03999 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
OPN1SWP03999 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
OPN1SWP03999 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
OPN1SWP03999 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OPN1SWP03999 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.23■□□□□ 0.35
OPN1SWP03999 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
OPN1SWP03999 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OPN1SWP03999 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.23■□□□□ 0.35
OPN1SWP03999 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
OPN1SWP03999 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.23■□□□□ 0.35
OPN1SWP03999 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
OPN1SWP03999 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.23■□□□□ 0.35
OPN1SWP03999 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.23■□□□□ 0.35
OPN1SWP03999 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
OPN1SWP03999 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OPN1SWP03999 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
OPN1SWP03999 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.23■□□□□ 0.35
OPN1SWP03999 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.23■□□□□ 0.35
OPN1SWP03999 AC073195.1-201ENST00000607241 877 ntBASIC17.23■□□□□ 0.35
OPN1SWP03999 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OPN1SWP03999 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
OPN1SWP03999 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
OPN1SWP03999 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
OPN1SWP03999 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
OPN1SWP03999 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
OPN1SWP03999 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OPN1SWP03999 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
OPN1SWP03999 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPN1SWP03999 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.22■□□□□ 0.35
OPN1SWP03999 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.22■□□□□ 0.35
OPN1SWP03999 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPN1SWP03999 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.22■□□□□ 0.35
OPN1SWP03999 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPN1SWP03999 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
OPN1SWP03999 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPN1SWP03999 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPN1SWP03999 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPN1SWP03999 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPN1SWP03999 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
OPN1SWP03999 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPN1SWP03999 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
OPN1SWP03999 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPN1SWP03999 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPN1SWP03999 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
OPN1SWP03999 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
OPN1SWP03999 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.22■□□□□ 0.35
OPN1SWP03999 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
OPN1SWP03999 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.22■□□□□ 0.35
OPN1SWP03999 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.22■□□□□ 0.35
OPN1SWP03999 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPN1SWP03999 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPN1SWP03999 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.22■□□□□ 0.35
OPN1SWP03999 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
OPN1SWP03999 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPN1SWP03999 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
OPN1SWP03999 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPN1SWP03999 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
OPN1SWP03999 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.22■□□□□ 0.35
OPN1SWP03999 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
OPN1SWP03999 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.21■□□□□ 0.35
OPN1SWP03999 AC138028.4-201ENST00000564984 1845 ntBASIC17.21■□□□□ 0.35
OPN1SWP03999 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
OPN1SWP03999 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OPN1SWP03999 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.21■□□□□ 0.35
OPN1SWP03999 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
OPN1SWP03999 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
OPN1SWP03999 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OPN1SWP03999 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OPN1SWP03999 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.21■□□□□ 0.35
OPN1SWP03999 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.21■□□□□ 0.35
OPN1SWP03999 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OPN1SWP03999 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OPN1SWP03999 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OPN1SWP03999 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OPN1SWP03999 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
OPN1SWP03999 AL109659.2-201ENST00000606809 1674 ntBASIC17.21■□□□□ 0.35
OPN1SWP03999 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
OPN1SWP03999 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OPN1SWP03999 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.21■□□□□ 0.35
OPN1SWP03999 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.35
OPN1SWP03999 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.21■□□□□ 0.35
OPN1SWP03999 CD99P1-205ENST00000527459 561 ntBASIC17.21■□□□□ 0.35
OPN1SWP03999 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
OPN1SWP03999 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.21■□□□□ 0.35
OPN1SWP03999 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
OPN1SWP03999 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OPN1SWP03999 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
OPN1SWP03999 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.21■□□□□ 0.34
OPN1SWP03999 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
OPN1SWP03999 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
OPN1SWP03999 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
OPN1SWP03999 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
OPN1SWP03999 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
OPN1SWP03999 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
OPN1SWP03999 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
OPN1SWP03999 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
OPN1SWP03999 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
OPN1SWP03999 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms