Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.3■□□□□ 0.2
APOC1P02654 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
APOC1P02654 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 RPS2P55-201ENST00000397318 883 ntBASIC16.3■□□□□ 0.2
APOC1P02654 AC107956.1-201ENST00000494359 873 ntBASIC16.3■□□□□ 0.2
APOC1P02654 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.3■□□□□ 0.2
APOC1P02654 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.3■□□□□ 0.2
APOC1P02654 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.3■□□□□ 0.2
APOC1P02654 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
APOC1P02654 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 AC009113.1-201ENST00000570267 2443 ntBASIC16.3■□□□□ 0.2
APOC1P02654 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
APOC1P02654 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.3■□□□□ 0.2
APOC1P02654 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
APOC1P02654 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.3■□□□□ 0.2
APOC1P02654 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
APOC1P02654 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
APOC1P02654 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOC1P02654 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
APOC1P02654 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APOC1P02654 AL357033.4-201ENST00000617703 1807 ntBASIC16.29■□□□□ 0.2
APOC1P02654 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.29■□□□□ 0.2
APOC1P02654 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOC1P02654 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.29■□□□□ 0.2
APOC1P02654 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
APOC1P02654 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOC1P02654 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
APOC1P02654 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOC1P02654 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOC1P02654 PRORSD1P-201ENST00000295112 541 ntBASIC16.29■□□□□ 0.2
APOC1P02654 ABHD17AP1-201ENST00000358206 933 ntBASIC16.29■□□□□ 0.2
APOC1P02654 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.29■□□□□ 0.2
APOC1P02654 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.29■□□□□ 0.2
APOC1P02654 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOC1P02654 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APOC1P02654 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.29■□□□□ 0.2
APOC1P02654 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.29■□□□□ 0.2
APOC1P02654 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APOC1P02654 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.29■□□□□ 0.2
APOC1P02654 SLC25A1P4-201ENST00000567977 778 ntBASIC16.29■□□□□ 0.2
APOC1P02654 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.29■□□□□ 0.2
APOC1P02654 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.29■□□□□ 0.2
APOC1P02654 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.29■□□□□ 0.2
APOC1P02654 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.29■□□□□ 0.2
APOC1P02654 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APOC1P02654 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
APOC1P02654 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOC1P02654 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOC1P02654 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOC1P02654 AC135050.7-201ENST00000624508 2218 ntBASIC16.29■□□□□ 0.2
APOC1P02654 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOC1P02654 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.29■□□□□ 0.2
APOC1P02654 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.29■□□□□ 0.2
APOC1P02654 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
APOC1P02654 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOC1P02654 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOC1P02654 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
APOC1P02654 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOC1P02654 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOC1P02654 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.28■□□□□ 0.2
APOC1P02654 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOC1P02654 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
APOC1P02654 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOC1P02654 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APOC1P02654 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOC1P02654 AP000593.1-201ENST00000393668 712 ntBASIC16.28■□□□□ 0.2
APOC1P02654 MESTP1-201ENST00000404287 994 ntBASIC16.28■□□□□ 0.2
APOC1P02654 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOC1P02654 AL355355.2-201ENST00000442321 338 ntBASIC16.28■□□□□ 0.2
APOC1P02654 GCSHP5-201ENST00000443090 522 ntBASIC16.28■□□□□ 0.2
APOC1P02654 AL158047.1-201ENST00000445918 881 ntBASIC16.28■□□□□ 0.2
APOC1P02654 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.28■□□□□ 0.2
APOC1P02654 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.28■□□□□ 0.2
APOC1P02654 AC233702.5-201ENST00000584107 538 ntBASIC16.28■□□□□ 0.2
APOC1P02654 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.28■□□□□ 0.2
APOC1P02654 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
APOC1P02654 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOC1P02654 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOC1P02654 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOC1P02654 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.28■□□□□ 0.2
APOC1P02654 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.28■□□□□ 0.2
APOC1P02654 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.28■□□□□ 0.2
APOC1P02654 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APOC1P02654 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
APOC1P02654 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APOC1P02654 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
APOC1P02654 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.27■□□□□ 0.2
APOC1P02654 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.27■□□□□ 0.2
APOC1P02654 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APOC1P02654 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms