Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZBED1O96006 KRT8P50-201ENST00000562022 1438 ntBASIC19.47■□□□□ 0.71
ZBED1O96006 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZBED1O96006 ANO7L1-203ENST00000602586 1720 ntBASIC19.47■□□□□ 0.71
ZBED1O96006 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.47■□□□□ 0.71
ZBED1O96006 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZBED1O96006 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZBED1O96006 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
ZBED1O96006 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZBED1O96006 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.47■□□□□ 0.71
ZBED1O96006 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.47■□□□□ 0.71
ZBED1O96006 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.47■□□□□ 0.71
ZBED1O96006 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.47■□□□□ 0.71
ZBED1O96006 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZBED1O96006 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.46■□□□□ 0.71
ZBED1O96006 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.46■□□□□ 0.71
ZBED1O96006 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZBED1O96006 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.46■□□□□ 0.71
ZBED1O96006 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZBED1O96006 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZBED1O96006 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZBED1O96006 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.46■□□□□ 0.71
ZBED1O96006 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ZBED1O96006 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZBED1O96006 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.46■□□□□ 0.71
ZBED1O96006 AP000593.1-201ENST00000393668 712 ntBASIC19.46■□□□□ 0.71
ZBED1O96006 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.46■□□□□ 0.71
ZBED1O96006 KRT18P38-201ENST00000449496 1282 ntBASIC19.46■□□□□ 0.71
ZBED1O96006 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZBED1O96006 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.46■□□□□ 0.71
ZBED1O96006 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.46■□□□□ 0.71
ZBED1O96006 AC010240.3-201ENST00000607688 395 ntBASIC19.46■□□□□ 0.71
ZBED1O96006 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZBED1O96006 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZBED1O96006 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.46■□□□□ 0.71
ZBED1O96006 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZBED1O96006 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZBED1O96006 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ZBED1O96006 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZBED1O96006 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZBED1O96006 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZBED1O96006 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ZBED1O96006 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZBED1O96006 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZBED1O96006 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.46■□□□□ 0.71
ZBED1O96006 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZBED1O96006 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZBED1O96006 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZBED1O96006 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZBED1O96006 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
ZBED1O96006 AC112777.1-201ENST00000540175 1423 ntBASIC19.45■□□□□ 0.7
ZBED1O96006 AL499627.1-201ENST00000569373 2188 ntBASIC19.45■□□□□ 0.7
ZBED1O96006 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZBED1O96006 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZBED1O96006 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.45■□□□□ 0.7
ZBED1O96006 RASA4DP-201ENST00000460726 1199 ntBASIC19.45■□□□□ 0.7
ZBED1O96006 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.45■□□□□ 0.7
ZBED1O96006 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZBED1O96006 MIR3917-201ENST00000580971 93 ntBASIC19.45■□□□□ 0.7
ZBED1O96006 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZBED1O96006 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZBED1O96006 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.45■□□□□ 0.7
ZBED1O96006 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZBED1O96006 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ZBED1O96006 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZBED1O96006 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZBED1O96006 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZBED1O96006 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZBED1O96006 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZBED1O96006 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZBED1O96006 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.45■□□□□ 0.7
ZBED1O96006 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZBED1O96006 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
ZBED1O96006 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZBED1O96006 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.44■□□□□ 0.7
ZBED1O96006 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZBED1O96006 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.44■□□□□ 0.7
ZBED1O96006 NEFHP1-201ENST00000412845 2629 ntBASIC19.44■□□□□ 0.7
ZBED1O96006 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZBED1O96006 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZBED1O96006 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZBED1O96006 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZBED1O96006 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.44■□□□□ 0.7
ZBED1O96006 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.44■□□□□ 0.7
ZBED1O96006 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZBED1O96006 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZBED1O96006 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZBED1O96006 SPDYE15P-201ENST00000424157 909 ntBASIC19.44■□□□□ 0.7
ZBED1O96006 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.44■□□□□ 0.7
ZBED1O96006 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.44■□□□□ 0.7
ZBED1O96006 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.44■□□□□ 0.7
ZBED1O96006 KRT18P35-201ENST00000510488 1269 ntBASIC19.44■□□□□ 0.7
ZBED1O96006 MIR3180-4-201ENST00000582223 153 ntBASIC19.44■□□□□ 0.7
ZBED1O96006 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ZBED1O96006 AL445228.2-201ENST00000605589 952 ntBASIC19.44■□□□□ 0.7
ZBED1O96006 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZBED1O96006 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.44■□□□□ 0.7
ZBED1O96006 AL157888.1-201ENST00000631930 593 ntBASIC19.44■□□□□ 0.7
ZBED1O96006 MYC-208ENST00000641036 567 ntBASIC19.44■□□□□ 0.7
ZBED1O96006 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms