Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.37■□□□□ 0.21
CNOT4O95628 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.37■□□□□ 0.21
CNOT4O95628 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNOT4O95628 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
CNOT4O95628 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNOT4O95628 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.37■□□□□ 0.21
CNOT4O95628 MTMR9LP-203ENST00000426597 1545 ntBASIC16.37■□□□□ 0.21
CNOT4O95628 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.37■□□□□ 0.21
CNOT4O95628 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNOT4O95628 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNOT4O95628 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNOT4O95628 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.37■□□□□ 0.21
CNOT4O95628 KRT18P48-201ENST00000434763 852 ntBASIC16.37■□□□□ 0.21
CNOT4O95628 RASA4DP-201ENST00000460726 1199 ntBASIC16.37■□□□□ 0.21
CNOT4O95628 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNOT4O95628 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.37■□□□□ 0.21
CNOT4O95628 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
CNOT4O95628 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.37■□□□□ 0.21
CNOT4O95628 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.37■□□□□ 0.21
CNOT4O95628 MIR3917-201ENST00000580971 93 ntBASIC16.37■□□□□ 0.21
CNOT4O95628 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
CNOT4O95628 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNOT4O95628 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNOT4O95628 AC006333.2-201ENST00000607957 2099 ntBASIC16.37■□□□□ 0.21
CNOT4O95628 AL357033.4-201ENST00000617703 1807 ntBASIC16.37■□□□□ 0.21
CNOT4O95628 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CNOT4O95628 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.37■□□□□ 0.21
CNOT4O95628 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNOT4O95628 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNOT4O95628 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CNOT4O95628 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNOT4O95628 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.37■□□□□ 0.21
CNOT4O95628 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
CNOT4O95628 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNOT4O95628 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNOT4O95628 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNOT4O95628 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNOT4O95628 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CNOT4O95628 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.36■□□□□ 0.21
CNOT4O95628 TNXA-203ENST00000507684 2038 ntBASIC16.36■□□□□ 0.21
CNOT4O95628 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNOT4O95628 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CNOT4O95628 OR6D1P-202ENST00000641007 5290 ntBASIC16.36■□□□□ 0.21
CNOT4O95628 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNOT4O95628 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
CNOT4O95628 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNOT4O95628 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.36■□□□□ 0.21
CNOT4O95628 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CNOT4O95628 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNOT4O95628 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNOT4O95628 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNOT4O95628 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNOT4O95628 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNOT4O95628 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CNOT4O95628 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.36■□□□□ 0.21
CNOT4O95628 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNOT4O95628 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.36■□□□□ 0.21
CNOT4O95628 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.36■□□□□ 0.21
CNOT4O95628 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNOT4O95628 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.36■□□□□ 0.21
CNOT4O95628 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.36■□□□□ 0.21
CNOT4O95628 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.36■□□□□ 0.21
CNOT4O95628 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.36■□□□□ 0.21
CNOT4O95628 AL121956.5-201ENST00000625261 221 ntBASIC16.36■□□□□ 0.21
CNOT4O95628 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.36■□□□□ 0.21
CNOT4O95628 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CNOT4O95628 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNOT4O95628 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNOT4O95628 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.36■□□□□ 0.21
CNOT4O95628 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNOT4O95628 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.36■□□□□ 0.21
CNOT4O95628 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNOT4O95628 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNOT4O95628 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNOT4O95628 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CNOT4O95628 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNOT4O95628 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNOT4O95628 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNOT4O95628 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNOT4O95628 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNOT4O95628 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CNOT4O95628 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNOT4O95628 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNOT4O95628 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNOT4O95628 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.35■□□□□ 0.21
CNOT4O95628 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNOT4O95628 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.35■□□□□ 0.21
CNOT4O95628 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNOT4O95628 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CNOT4O95628 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CNOT4O95628 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNOT4O95628 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.35■□□□□ 0.21
CNOT4O95628 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.35■□□□□ 0.21
CNOT4O95628 PCED1CP-201ENST00000419887 785 ntBASIC16.35■□□□□ 0.21
CNOT4O95628 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.35■□□□□ 0.21
CNOT4O95628 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.35■□□□□ 0.21
CNOT4O95628 AL359075.1-203ENST00000462729 1002 ntBASIC16.35■□□□□ 0.21
CNOT4O95628 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNOT4O95628 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.35■□□□□ 0.21
CNOT4O95628 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms