Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC12.41□□□□□ -0.42
SNCGO76070 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC12.41□□□□□ -0.42
SNCGO76070 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC12.41□□□□□ -0.42
SNCGO76070 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.41□□□□□ -0.42
SNCGO76070 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12.41□□□□□ -0.42
SNCGO76070 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 AC067750.1-201ENST00000608826 6545 ntBASIC12.41□□□□□ -0.42
SNCGO76070 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC12.41□□□□□ -0.42
SNCGO76070 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 LINC00554-201ENST00000564841 3011 ntBASIC12.4□□□□□ -0.42
SNCGO76070 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
SNCGO76070 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC12.4□□□□□ -0.42
SNCGO76070 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SNCGO76070 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC12.4□□□□□ -0.42
SNCGO76070 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SNCGO76070 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC12.4□□□□□ -0.42
SNCGO76070 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SNCGO76070 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
SNCGO76070 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC12.4□□□□□ -0.42
SNCGO76070 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC12.4□□□□□ -0.42
SNCGO76070 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC12.4□□□□□ -0.42
SNCGO76070 RARRES2P11-201ENST00000635158 484 ntBASIC12.4□□□□□ -0.42
SNCGO76070 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 AC008764.6-201ENST00000595909 2069 ntBASIC12.4□□□□□ -0.42
SNCGO76070 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 PCDHA3-202ENST00000532566 4594 ntBASIC12.4□□□□□ -0.42
SNCGO76070 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SNCGO76070 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC12.4□□□□□ -0.42
SNCGO76070 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
SNCGO76070 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SNCGO76070 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
SNCGO76070 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC12.4□□□□□ -0.43
SNCGO76070 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SNCGO76070 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC12.4□□□□□ -0.43
SNCGO76070 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SNCGO76070 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
SNCGO76070 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SNCGO76070 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
SNCGO76070 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SNCGO76070 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCGO76070 AC006333.2-201ENST00000607957 2099 ntBASIC12.39□□□□□ -0.43
SNCGO76070 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCGO76070 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCGO76070 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCGO76070 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCGO76070 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCGO76070 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCGO76070 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCGO76070 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SNCGO76070 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCGO76070 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SNCGO76070 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCGO76070 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
SNCGO76070 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCGO76070 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SNCGO76070 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCGO76070 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SNCGO76070 MFF-208ENST00000409616 1247 ntTSL 5 BASIC12.39□□□□□ -0.43
SNCGO76070 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC12.39□□□□□ -0.43
SNCGO76070 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SNCGO76070 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNCGO76070 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SNCGO76070 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms