Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1BO75841 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1BO75841 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1BO75841 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1BO75841 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.07■□□□□ 0.16
UPK1BO75841 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1BO75841 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
UPK1BO75841 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1BO75841 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1BO75841 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1BO75841 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
UPK1BO75841 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1BO75841 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1BO75841 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
UPK1BO75841 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.06■□□□□ 0.16
UPK1BO75841 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
UPK1BO75841 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 AL138688.1-201ENST00000624851 1594 ntBASIC16.06■□□□□ 0.16
UPK1BO75841 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 KRT8P8-201ENST00000434750 1448 ntBASIC16.06■□□□□ 0.16
UPK1BO75841 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.06■□□□□ 0.16
UPK1BO75841 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.06■□□□□ 0.16
UPK1BO75841 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
UPK1BO75841 MIR4466-201ENST00000606121 54 ntBASIC16.06■□□□□ 0.16
UPK1BO75841 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.06■□□□□ 0.16
UPK1BO75841 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
UPK1BO75841 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
UPK1BO75841 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
UPK1BO75841 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK1BO75841 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
UPK1BO75841 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1BO75841 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.05■□□□□ 0.16
UPK1BO75841 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
UPK1BO75841 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
UPK1BO75841 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
UPK1BO75841 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.05■□□□□ 0.16
UPK1BO75841 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
UPK1BO75841 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
UPK1BO75841 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
UPK1BO75841 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1BO75841 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1BO75841 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.05■□□□□ 0.16
UPK1BO75841 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.05■□□□□ 0.16
UPK1BO75841 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.05■□□□□ 0.16
UPK1BO75841 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1BO75841 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.05■□□□□ 0.16
UPK1BO75841 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1BO75841 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1BO75841 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.05■□□□□ 0.16
UPK1BO75841 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1BO75841 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
UPK1BO75841 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1BO75841 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
UPK1BO75841 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
UPK1BO75841 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
UPK1BO75841 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1BO75841 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1BO75841 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.05■□□□□ 0.16
UPK1BO75841 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.05■□□□□ 0.16
UPK1BO75841 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UPK1BO75841 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
UPK1BO75841 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.05■□□□□ 0.16
UPK1BO75841 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.05■□□□□ 0.16
UPK1BO75841 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UPK1BO75841 AC092850.2-201ENST00000623821 2697 ntBASIC16.04■□□□□ 0.16
UPK1BO75841 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.04■□□□□ 0.16
UPK1BO75841 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.04■□□□□ 0.16
UPK1BO75841 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.04■□□□□ 0.16
UPK1BO75841 KRT8P45-201ENST00000414328 1447 ntBASIC16.04■□□□□ 0.16
UPK1BO75841 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.04■□□□□ 0.16
UPK1BO75841 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UPK1BO75841 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.04■□□□□ 0.16
UPK1BO75841 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.04■□□□□ 0.16
UPK1BO75841 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UPK1BO75841 PCDHB17P-201ENST00000539533 2393 ntBASIC16.04■□□□□ 0.16
UPK1BO75841 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.04■□□□□ 0.16
UPK1BO75841 AC124283.5-201ENST00000624661 1809 ntBASIC16.04■□□□□ 0.16
UPK1BO75841 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UPK1BO75841 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
UPK1BO75841 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms