Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
PFDN1O60925 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.5■□□□□ 0.23
PFDN1O60925 AC007950.2-201ENST00000615045 2347 ntBASIC16.5■□□□□ 0.23
PFDN1O60925 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PFDN1O60925 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.5■□□□□ 0.23
PFDN1O60925 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PFDN1O60925 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PFDN1O60925 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.49■□□□□ 0.23
PFDN1O60925 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PFDN1O60925 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PFDN1O60925 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC16.49■□□□□ 0.23
PFDN1O60925 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PFDN1O60925 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PFDN1O60925 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PFDN1O60925 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PFDN1O60925 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PFDN1O60925 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PFDN1O60925 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PFDN1O60925 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PFDN1O60925 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.49■□□□□ 0.23
PFDN1O60925 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.49■□□□□ 0.23
PFDN1O60925 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PFDN1O60925 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.49■□□□□ 0.23
PFDN1O60925 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.49■□□□□ 0.23
PFDN1O60925 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PFDN1O60925 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PFDN1O60925 AP001271.2-201ENST00000624018 1556 ntBASIC16.49■□□□□ 0.23
PFDN1O60925 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.49■□□□□ 0.23
PFDN1O60925 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PFDN1O60925 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PFDN1O60925 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PFDN1O60925 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PFDN1O60925 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PFDN1O60925 C8orf49-201ENST00000525043 1968 ntBASIC16.49■□□□□ 0.23
PFDN1O60925 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PFDN1O60925 AC133637.1-201ENST00000624115 1537 ntBASIC16.49■□□□□ 0.23
PFDN1O60925 MIR600HG-201ENST00000449175 5984 ntBASIC16.49■□□□□ 0.23
PFDN1O60925 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.49■□□□□ 0.23
PFDN1O60925 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PFDN1O60925 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PFDN1O60925 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PFDN1O60925 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
PFDN1O60925 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PFDN1O60925 AC099063.4-201ENST00000641099 1602 ntBASIC16.48■□□□□ 0.23
PFDN1O60925 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PFDN1O60925 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.48■□□□□ 0.23
PFDN1O60925 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PFDN1O60925 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.48■□□□□ 0.23
PFDN1O60925 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
PFDN1O60925 AC026691.1-201ENST00000602502 2017 ntBASIC16.48■□□□□ 0.23
PFDN1O60925 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.48■□□□□ 0.23
PFDN1O60925 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.48■□□□□ 0.23
PFDN1O60925 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PFDN1O60925 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.48■□□□□ 0.23
PFDN1O60925 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.48■□□□□ 0.23
PFDN1O60925 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PFDN1O60925 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.48■□□□□ 0.23
PFDN1O60925 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PFDN1O60925 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PFDN1O60925 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PFDN1O60925 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PFDN1O60925 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PFDN1O60925 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PFDN1O60925 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PFDN1O60925 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.48■□□□□ 0.23
PFDN1O60925 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PFDN1O60925 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PFDN1O60925 AL451085.2-201ENST00000605085 799 ntBASIC16.48■□□□□ 0.23
PFDN1O60925 MIR7108-201ENST00000614319 87 ntBASIC16.48■□□□□ 0.23
PFDN1O60925 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PFDN1O60925 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.48■□□□□ 0.23
PFDN1O60925 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PFDN1O60925 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.48■□□□□ 0.23
PFDN1O60925 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PFDN1O60925 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.48■□□□□ 0.23
PFDN1O60925 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PFDN1O60925 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PFDN1O60925 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PFDN1O60925 AC106886.4-201ENST00000623557 2502 ntBASIC16.48■□□□□ 0.23
PFDN1O60925 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PFDN1O60925 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PFDN1O60925 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PFDN1O60925 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PFDN1O60925 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
PFDN1O60925 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PFDN1O60925 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
PFDN1O60925 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PFDN1O60925 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PFDN1O60925 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PFDN1O60925 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PFDN1O60925 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.47■□□□□ 0.23
PFDN1O60925 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PFDN1O60925 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PFDN1O60925 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PFDN1O60925 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PFDN1O60925 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PFDN1O60925 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
PFDN1O60925 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PFDN1O60925 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PFDN1O60925 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms