Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SH2D1AO60880 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SH2D1AO60880 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SH2D1AO60880 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
SH2D1AO60880 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SH2D1AO60880 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.79□□□□□ -0.2
SH2D1AO60880 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SH2D1AO60880 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SH2D1AO60880 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SH2D1AO60880 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SH2D1AO60880 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SH2D1AO60880 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SH2D1AO60880 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
SH2D1AO60880 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SH2D1AO60880 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.79□□□□□ -0.2
SH2D1AO60880 GUSBP6-202ENST00000438529 1198 ntBASIC13.79□□□□□ -0.2
SH2D1AO60880 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.79□□□□□ -0.2
SH2D1AO60880 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.79□□□□□ -0.2
SH2D1AO60880 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.79□□□□□ -0.2
SH2D1AO60880 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SH2D1AO60880 AC083880.1-201ENST00000608266 535 ntBASIC13.79□□□□□ -0.2
SH2D1AO60880 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SH2D1AO60880 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SH2D1AO60880 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SH2D1AO60880 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SH2D1AO60880 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.79□□□□□ -0.2
SH2D1AO60880 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
SH2D1AO60880 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SH2D1AO60880 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SH2D1AO60880 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SH2D1AO60880 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.78□□□□□ -0.2
SH2D1AO60880 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.78□□□□□ -0.2
SH2D1AO60880 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.78□□□□□ -0.2
SH2D1AO60880 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SH2D1AO60880 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SH2D1AO60880 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.78□□□□□ -0.2
SH2D1AO60880 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.78□□□□□ -0.2
SH2D1AO60880 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.78□□□□□ -0.2
SH2D1AO60880 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.78□□□□□ -0.2
SH2D1AO60880 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.78□□□□□ -0.2
SH2D1AO60880 PRSS44-201ENST00000515154 1146 ntBASIC13.78□□□□□ -0.2
SH2D1AO60880 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.78□□□□□ -0.2
SH2D1AO60880 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SH2D1AO60880 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.78□□□□□ -0.2
SH2D1AO60880 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.78□□□□□ -0.2
SH2D1AO60880 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SH2D1AO60880 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.78□□□□□ -0.2
SH2D1AO60880 IKBKGP1-201ENST00000612193 1073 ntBASIC13.78□□□□□ -0.2
SH2D1AO60880 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.78□□□□□ -0.2
SH2D1AO60880 PFKL-212ENST00000628044 129 ntTSL 3 BASIC13.78□□□□□ -0.2
SH2D1AO60880 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.78□□□□□ -0.2
SH2D1AO60880 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SH2D1AO60880 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.78□□□□□ -0.2
SH2D1AO60880 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.78□□□□□ -0.2
SH2D1AO60880 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.78□□□□□ -0.2
SH2D1AO60880 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.78□□□□□ -0.2
SH2D1AO60880 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.78□□□□□ -0.2
SH2D1AO60880 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.78□□□□□ -0.2
SH2D1AO60880 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SH2D1AO60880 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SH2D1AO60880 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.78□□□□□ -0.2
SH2D1AO60880 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.77□□□□□ -0.2
SH2D1AO60880 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
SH2D1AO60880 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
SH2D1AO60880 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.77□□□□□ -0.2
SH2D1AO60880 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SH2D1AO60880 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SH2D1AO60880 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.77□□□□□ -0.21
SH2D1AO60880 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SH2D1AO60880 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.77□□□□□ -0.21
SH2D1AO60880 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SH2D1AO60880 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SH2D1AO60880 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 262.5 ms