Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
URB1O60287 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
URB1O60287 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.37■□□□□ 0.37
URB1O60287 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
URB1O60287 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.37■□□□□ 0.37
URB1O60287 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
URB1O60287 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.37■□□□□ 0.37
URB1O60287 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
URB1O60287 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.37■□□□□ 0.37
URB1O60287 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.37■□□□□ 0.37
URB1O60287 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.37■□□□□ 0.37
URB1O60287 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.37■□□□□ 0.37
URB1O60287 FAM215A-202ENST00000632077 792 ntBASIC17.37■□□□□ 0.37
URB1O60287 AL353692.3-201ENST00000407031 1396 ntBASIC17.37■□□□□ 0.37
URB1O60287 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.37■□□□□ 0.37
URB1O60287 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
URB1O60287 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
URB1O60287 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
URB1O60287 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
URB1O60287 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
URB1O60287 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
URB1O60287 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
URB1O60287 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.36■□□□□ 0.37
URB1O60287 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.36■□□□□ 0.37
URB1O60287 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
URB1O60287 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.36■□□□□ 0.37
URB1O60287 MIR5100-201ENST00000579544 119 ntBASIC17.36■□□□□ 0.37
URB1O60287 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
URB1O60287 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
URB1O60287 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.36■□□□□ 0.37
URB1O60287 AC083906.6-201ENST00000641366 219 ntBASIC17.36■□□□□ 0.37
URB1O60287 AC079781.4-201ENST00000641908 219 ntBASIC17.36■□□□□ 0.37
URB1O60287 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
URB1O60287 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
URB1O60287 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
URB1O60287 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
URB1O60287 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
URB1O60287 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.36■□□□□ 0.37
URB1O60287 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
URB1O60287 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.36■□□□□ 0.37
URB1O60287 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
URB1O60287 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
URB1O60287 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
URB1O60287 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.36■□□□□ 0.37
URB1O60287 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.36■□□□□ 0.37
URB1O60287 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
URB1O60287 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
URB1O60287 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.36■□□□□ 0.37
URB1O60287 GPX1P2-201ENST00000429271 606 ntBASIC17.36■□□□□ 0.37
URB1O60287 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
URB1O60287 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
URB1O60287 RNA5SP415-201ENST00000517246 115 ntBASIC17.36■□□□□ 0.37
URB1O60287 MIR3687-2-201ENST00000577708 61 ntBASIC17.36■□□□□ 0.37
URB1O60287 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.36■□□□□ 0.37
URB1O60287 MIR3687-1-201ENST00000614492 61 ntBASIC17.36■□□□□ 0.37
URB1O60287 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
URB1O60287 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
URB1O60287 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
URB1O60287 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
URB1O60287 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
URB1O60287 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
URB1O60287 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.35■□□□□ 0.37
URB1O60287 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
URB1O60287 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
URB1O60287 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
URB1O60287 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
URB1O60287 AC104390.1-201ENST00000555663 520 ntBASIC17.35■□□□□ 0.37
URB1O60287 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.35■□□□□ 0.37
URB1O60287 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
URB1O60287 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.35■□□□□ 0.37
URB1O60287 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
URB1O60287 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
URB1O60287 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.35■□□□□ 0.37
URB1O60287 AC009237.14-201ENST00000609975 1594 ntBASIC17.35■□□□□ 0.37
URB1O60287 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
URB1O60287 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
URB1O60287 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
URB1O60287 AC099343.3-201ENST00000605834 2503 ntBASIC17.35■□□□□ 0.37
URB1O60287 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
URB1O60287 AC090340.1-201ENST00000620778 4980 ntBASIC17.35■□□□□ 0.37
URB1O60287 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
URB1O60287 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.35■□□□□ 0.37
URB1O60287 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
URB1O60287 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
URB1O60287 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
URB1O60287 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
URB1O60287 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
URB1O60287 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
URB1O60287 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.34■□□□□ 0.37
URB1O60287 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.34■□□□□ 0.37
URB1O60287 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
URB1O60287 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
URB1O60287 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.34■□□□□ 0.37
URB1O60287 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
URB1O60287 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
URB1O60287 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
URB1O60287 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.34■□□□□ 0.37
URB1O60287 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
URB1O60287 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
URB1O60287 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms