Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PROM1O43490 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.49■□□□□ 0.39
PROM1O43490 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PROM1O43490 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PROM1O43490 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PROM1O43490 AC007613.1-201ENST00000572811 2597 ntBASIC17.49■□□□□ 0.39
PROM1O43490 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PROM1O43490 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PROM1O43490 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PROM1O43490 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PROM1O43490 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.49■□□□□ 0.39
PROM1O43490 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PROM1O43490 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.49■□□□□ 0.39
PROM1O43490 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.48■□□□□ 0.39
PROM1O43490 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.48■□□□□ 0.39
PROM1O43490 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.48■□□□□ 0.39
PROM1O43490 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PROM1O43490 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.48■□□□□ 0.39
PROM1O43490 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.48■□□□□ 0.39
PROM1O43490 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.48■□□□□ 0.39
PROM1O43490 AC104390.1-201ENST00000555663 520 ntBASIC17.48■□□□□ 0.39
PROM1O43490 AL445228.2-201ENST00000605589 952 ntBASIC17.48■□□□□ 0.39
PROM1O43490 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 AC005363.2-201ENST00000618631 242 ntBASIC17.48■□□□□ 0.39
PROM1O43490 AC141257.4-201ENST00000634557 245 ntBASIC17.48■□□□□ 0.39
PROM1O43490 AC136944.6-201ENST00000634818 245 ntBASIC17.48■□□□□ 0.39
PROM1O43490 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.48■□□□□ 0.39
PROM1O43490 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
PROM1O43490 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PROM1O43490 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.48■□□□□ 0.39
PROM1O43490 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.48■□□□□ 0.39
PROM1O43490 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PROM1O43490 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PROM1O43490 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PROM1O43490 AL163051.1-201ENST00000569214 1512 ntBASIC17.47■□□□□ 0.39
PROM1O43490 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PROM1O43490 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PROM1O43490 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PROM1O43490 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
PROM1O43490 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.47■□□□□ 0.39
PROM1O43490 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.47■□□□□ 0.39
PROM1O43490 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.47■□□□□ 0.39
PROM1O43490 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.47■□□□□ 0.39
PROM1O43490 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
PROM1O43490 LIN28AP1-201ENST00000429574 405 ntBASIC17.47■□□□□ 0.39
PROM1O43490 AC010203.1-204ENST00000548782 407 ntBASIC17.47■□□□□ 0.39
PROM1O43490 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.47■□□□□ 0.39
PROM1O43490 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.47■□□□□ 0.39
PROM1O43490 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PROM1O43490 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PROM1O43490 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PROM1O43490 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.47■□□□□ 0.39
PROM1O43490 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.47■□□□□ 0.39
PROM1O43490 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PROM1O43490 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PROM1O43490 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PROM1O43490 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PROM1O43490 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PROM1O43490 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PROM1O43490 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PROM1O43490 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PROM1O43490 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PROM1O43490 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.47■□□□□ 0.39
PROM1O43490 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PROM1O43490 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PROM1O43490 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.47■□□□□ 0.39
PROM1O43490 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PROM1O43490 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PROM1O43490 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PROM1O43490 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PROM1O43490 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PROM1O43490 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.46■□□□□ 0.39
PROM1O43490 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PROM1O43490 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.46■□□□□ 0.39
PROM1O43490 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms