Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASQ2O14958 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CASQ2O14958 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CASQ2O14958 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASQ2O14958 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASQ2O14958 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASQ2O14958 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASQ2O14958 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.51■□□□□ 0.39
CASQ2O14958 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.51■□□□□ 0.39
CASQ2O14958 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASQ2O14958 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASQ2O14958 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CASQ2O14958 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.51■□□□□ 0.39
CASQ2O14958 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CASQ2O14958 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASQ2O14958 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.51■□□□□ 0.39
CASQ2O14958 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CASQ2O14958 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.51■□□□□ 0.39
CASQ2O14958 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.51■□□□□ 0.39
CASQ2O14958 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CASQ2O14958 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASQ2O14958 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASQ2O14958 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASQ2O14958 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
CASQ2O14958 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CASQ2O14958 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASQ2O14958 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CASQ2O14958 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CASQ2O14958 AC008556.1-201ENST00000610908 2040 ntBASIC17.5■□□□□ 0.39
CASQ2O14958 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASQ2O14958 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CASQ2O14958 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CASQ2O14958 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASQ2O14958 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASQ2O14958 AC006116.8-202ENST00000587620 1550 ntBASIC17.5■□□□□ 0.39
CASQ2O14958 AC063926.3-201ENST00000624734 5658 ntBASIC17.5■□□□□ 0.39
CASQ2O14958 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASQ2O14958 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASQ2O14958 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASQ2O14958 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASQ2O14958 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CASQ2O14958 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CASQ2O14958 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CASQ2O14958 TSPY21P-201ENST00000433481 731 ntBASIC17.5■□□□□ 0.39
CASQ2O14958 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.5■□□□□ 0.39
CASQ2O14958 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.5■□□□□ 0.39
CASQ2O14958 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.5■□□□□ 0.39
CASQ2O14958 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASQ2O14958 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CASQ2O14958 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.5■□□□□ 0.39
CASQ2O14958 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CASQ2O14958 LINC00602-201ENST00000629776 2065 ntBASIC17.5■□□□□ 0.39
CASQ2O14958 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CASQ2O14958 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CASQ2O14958 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CASQ2O14958 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASQ2O14958 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CASQ2O14958 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CASQ2O14958 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CASQ2O14958 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CASQ2O14958 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASQ2O14958 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASQ2O14958 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASQ2O14958 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASQ2O14958 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CASQ2O14958 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASQ2O14958 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASQ2O14958 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASQ2O14958 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASQ2O14958 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CASQ2O14958 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASQ2O14958 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.49■□□□□ 0.39
CASQ2O14958 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASQ2O14958 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CASQ2O14958 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASQ2O14958 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CASQ2O14958 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.49■□□□□ 0.39
CASQ2O14958 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASQ2O14958 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CASQ2O14958 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.49■□□□□ 0.39
CASQ2O14958 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CASQ2O14958 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.49■□□□□ 0.39
CASQ2O14958 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.49■□□□□ 0.39
CASQ2O14958 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASQ2O14958 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CASQ2O14958 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASQ2O14958 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASQ2O14958 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CASQ2O14958 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASQ2O14958 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.49■□□□□ 0.39
CASQ2O14958 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASQ2O14958 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.48■□□□□ 0.39
CASQ2O14958 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.48■□□□□ 0.39
CASQ2O14958 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CASQ2O14958 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CASQ2O14958 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CASQ2O14958 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CASQ2O14958 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CASQ2O14958 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.48■□□□□ 0.39
CASQ2O14958 AC112777.1-201ENST00000540175 1423 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms