Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CBR1-202ENST00000399191 838 ntTSL 3 BASIC29.69■■■□□ 2.34
CHD1O14646 CRYGEP-201ENST00000412192 528 ntBASIC29.69■■■□□ 2.34
CHD1O14646 HCG4B-203ENST00000450128 991 ntBASIC29.69■■■□□ 2.34
CHD1O14646 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC29.69■■■□□ 2.34
CHD1O14646 AJ011932.1-201ENST00000621707 465 ntBASIC29.69■■■□□ 2.34
CHD1O14646 AC005593.1-201ENST00000624894 515 ntBASIC29.69■■■□□ 2.34
CHD1O14646 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC29.69■■■□□ 2.34
CHD1O14646 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC29.69■■■□□ 2.34
CHD1O14646 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC29.69■■■□□ 2.34
CHD1O14646 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC29.69■■■□□ 2.34
CHD1O14646 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC29.69■■■□□ 2.34
CHD1O14646 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC29.69■■■□□ 2.34
CHD1O14646 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CHD1O14646 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CHD1O14646 TCF3P1-201ENST00000423021 1937 ntBASIC29.69■■■□□ 2.34
CHD1O14646 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CHD1O14646 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CHD1O14646 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CHD1O14646 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CHD1O14646 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
CHD1O14646 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CHD1O14646 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC29.68■■■□□ 2.34
CHD1O14646 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC29.68■■■□□ 2.34
CHD1O14646 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CHD1O14646 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC29.68■■■□□ 2.34
CHD1O14646 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC29.68■■■□□ 2.34
CHD1O14646 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC29.68■■■□□ 2.34
CHD1O14646 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CHD1O14646 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CHD1O14646 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CHD1O14646 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
CHD1O14646 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC29.68■■■□□ 2.34
CHD1O14646 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CHD1O14646 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CHD1O14646 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC29.68■■■□□ 2.34
CHD1O14646 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC29.68■■■□□ 2.34
CHD1O14646 CIPC-205ENST00000555437 566 ntTSL 3 BASIC29.68■■■□□ 2.34
CHD1O14646 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CHD1O14646 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
CHD1O14646 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
CHD1O14646 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CHD1O14646 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC29.67■■■□□ 2.34
CHD1O14646 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC29.67■■■□□ 2.34
CHD1O14646 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
CHD1O14646 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC29.67■■■□□ 2.34
CHD1O14646 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
CHD1O14646 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CHD1O14646 AC092474.2-201ENST00000424288 719 ntBASIC29.67■■■□□ 2.34
CHD1O14646 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC29.67■■■□□ 2.34
CHD1O14646 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC29.67■■■□□ 2.34
CHD1O14646 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC29.67■■■□□ 2.34
CHD1O14646 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC29.67■■■□□ 2.34
CHD1O14646 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CHD1O14646 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CHD1O14646 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CHD1O14646 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CHD1O14646 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
CHD1O14646 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CHD1O14646 MIR149-201ENST00000384879 89 ntBASIC29.66■■■□□ 2.34
CHD1O14646 AC005034.1-201ENST00000426657 489 ntBASIC29.66■■■□□ 2.34
CHD1O14646 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
CHD1O14646 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
CHD1O14646 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CHD1O14646 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
CHD1O14646 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC29.65■■■□□ 2.34
CHD1O14646 BAD-202ENST00000394531 631 ntTSL 3 BASIC29.65■■■□□ 2.34
CHD1O14646 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC29.65■■■□□ 2.34
CHD1O14646 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC29.65■■■□□ 2.34
CHD1O14646 PDPK2P-202ENST00000562415 1191 ntBASIC29.65■■■□□ 2.34
CHD1O14646 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC29.65■■■□□ 2.34
CHD1O14646 AC012645.4-201ENST00000610691 1061 ntBASIC29.65■■■□□ 2.34
CHD1O14646 AF228730.6-201ENST00000641497 218 ntBASIC29.65■■■□□ 2.34
CHD1O14646 AC084121.3-201ENST00000641716 218 ntBASIC29.65■■■□□ 2.34
CHD1O14646 AC105233.6-201ENST00000642093 218 ntBASIC29.65■■■□□ 2.34
CHD1O14646 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CHD1O14646 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
CHD1O14646 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CHD1O14646 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC29.65■■■□□ 2.34
CHD1O14646 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC29.65■■■□□ 2.34
CHD1O14646 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC29.65■■■□□ 2.34
CHD1O14646 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CHD1O14646 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC29.65■■■□□ 2.34
CHD1O14646 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CHD1O14646 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
CHD1O14646 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC29.65■■■□□ 2.34
CHD1O14646 METTL26-204ENST00000397665 558 ntTSL 2 BASIC29.65■■■□□ 2.34
CHD1O14646 MAL2-202ENST00000531508 892 ntTSL 3 BASIC29.65■■■□□ 2.34
CHD1O14646 MIR4751-201ENST00000578027 74 ntBASIC29.65■■■□□ 2.34
CHD1O14646 AC073592.4-201ENST00000623827 446 ntBASIC29.65■■■□□ 2.34
CHD1O14646 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CHD1O14646 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CHD1O14646 MED17-221ENST00000639724 2317 ntTSL 5 BASIC29.64■■■□□ 2.34
CHD1O14646 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CHD1O14646 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
CHD1O14646 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CHD1O14646 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC29.64■■■□□ 2.34
CHD1O14646 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC29.64■■■□□ 2.34
CHD1O14646 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.34
CHD1O14646 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC29.64■■■□□ 2.34
CHD1O14646 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms