Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK2O00526 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
UPK2O00526 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UPK2O00526 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.8□□□□□ -0.04
UPK2O00526 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK2O00526 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK2O00526 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK2O00526 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UPK2O00526 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UPK2O00526 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK2O00526 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK2O00526 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
UPK2O00526 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK2O00526 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK2O00526 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK2O00526 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK2O00526 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK2O00526 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK2O00526 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UPK2O00526 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK2O00526 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.79□□□□□ -0.04
UPK2O00526 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
UPK2O00526 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
UPK2O00526 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK2O00526 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.79□□□□□ -0.04
UPK2O00526 AL355355.2-201ENST00000442321 338 ntBASIC14.79□□□□□ -0.04
UPK2O00526 AL158047.1-201ENST00000445918 881 ntBASIC14.79□□□□□ -0.04
UPK2O00526 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.79□□□□□ -0.04
UPK2O00526 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UPK2O00526 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK2O00526 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UPK2O00526 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.79□□□□□ -0.04
UPK2O00526 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.79□□□□□ -0.04
UPK2O00526 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.79□□□□□ -0.04
UPK2O00526 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UPK2O00526 AC233702.5-201ENST00000584107 538 ntBASIC14.79□□□□□ -0.04
UPK2O00526 REXO1L10P-201ENST00000615707 1290 ntBASIC14.79□□□□□ -0.04
UPK2O00526 REXO1L12P-201ENST00000622156 912 ntBASIC14.79□□□□□ -0.04
UPK2O00526 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.79□□□□□ -0.04
UPK2O00526 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK2O00526 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK2O00526 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK2O00526 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 REXO1L9P-201ENST00000604264 2108 ntBASIC14.78□□□□□ -0.04
UPK2O00526 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.78□□□□□ -0.04
UPK2O00526 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.78□□□□□ -0.04
UPK2O00526 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK2O00526 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
UPK2O00526 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
UPK2O00526 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
UPK2O00526 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
UPK2O00526 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
UPK2O00526 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK2O00526 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK2O00526 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.78□□□□□ -0.04
UPK2O00526 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.78□□□□□ -0.04
UPK2O00526 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK2O00526 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
UPK2O00526 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.78□□□□□ -0.04
UPK2O00526 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.78□□□□□ -0.04
UPK2O00526 AL049637.2-201ENST00000641778 930 ntBASIC14.78□□□□□ -0.04
UPK2O00526 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.78□□□□□ -0.04
UPK2O00526 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK2O00526 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK2O00526 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK2O00526 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
UPK2O00526 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK2O00526 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK2O00526 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK2O00526 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.77□□□□□ -0.04
UPK2O00526 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
UPK2O00526 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UPK2O00526 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.77□□□□□ -0.04
UPK2O00526 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.77□□□□□ -0.04
UPK2O00526 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UPK2O00526 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms