Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.15□□□□□ -0.15
NDUFA4O00483 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
NDUFA4O00483 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NDUFA4O00483 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.14□□□□□ -0.15
NDUFA4O00483 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFA4O00483 AC135050.7-201ENST00000624508 2218 ntBASIC14.14□□□□□ -0.15
NDUFA4O00483 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NDUFA4O00483 GMCL1P1-201ENST00000463439 1581 ntBASIC14.14□□□□□ -0.15
NDUFA4O00483 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NDUFA4O00483 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NDUFA4O00483 ATP5G1P1-201ENST00000448724 379 ntBASIC14.14□□□□□ -0.15
NDUFA4O00483 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NDUFA4O00483 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFA4O00483 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFA4O00483 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFA4O00483 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.14□□□□□ -0.15
NDUFA4O00483 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFA4O00483 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 AC092865.7-201ENST00000641832 219 ntBASIC14.14□□□□□ -0.15
NDUFA4O00483 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFA4O00483 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.14□□□□□ -0.15
NDUFA4O00483 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFA4O00483 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NDUFA4O00483 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA4O00483 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA4O00483 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA4O00483 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA4O00483 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA4O00483 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.13□□□□□ -0.15
NDUFA4O00483 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA4O00483 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA4O00483 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA4O00483 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA4O00483 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA4O00483 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA4O00483 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
NDUFA4O00483 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA4O00483 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA4O00483 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.13□□□□□ -0.15
NDUFA4O00483 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.13□□□□□ -0.15
NDUFA4O00483 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.13□□□□□ -0.15
NDUFA4O00483 AC010240.3-201ENST00000607688 395 ntBASIC14.13□□□□□ -0.15
NDUFA4O00483 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.13□□□□□ -0.15
NDUFA4O00483 AC141257.4-201ENST00000634557 245 ntBASIC14.13□□□□□ -0.15
NDUFA4O00483 AC136944.6-201ENST00000634818 245 ntBASIC14.13□□□□□ -0.15
NDUFA4O00483 AC097493.4-201ENST00000641197 219 ntBASIC14.13□□□□□ -0.15
NDUFA4O00483 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA4O00483 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA4O00483 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.13□□□□□ -0.15
NDUFA4O00483 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA4O00483 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.13□□□□□ -0.15
NDUFA4O00483 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.13□□□□□ -0.15
NDUFA4O00483 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.13□□□□□ -0.15
NDUFA4O00483 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NDUFA4O00483 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFA4O00483 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA4O00483 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA4O00483 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NDUFA4O00483 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.12□□□□□ -0.15
NDUFA4O00483 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.12□□□□□ -0.15
NDUFA4O00483 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.12□□□□□ -0.15
NDUFA4O00483 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA4O00483 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA4O00483 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA4O00483 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.12□□□□□ -0.15
NDUFA4O00483 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA4O00483 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA4O00483 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
NDUFA4O00483 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA4O00483 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.12□□□□□ -0.15
NDUFA4O00483 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.12□□□□□ -0.15
NDUFA4O00483 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.12□□□□□ -0.15
NDUFA4O00483 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA4O00483 SEC1P-202ENST00000473944 940 ntBASIC14.12□□□□□ -0.15
NDUFA4O00483 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.12□□□□□ -0.15
NDUFA4O00483 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.12□□□□□ -0.15
NDUFA4O00483 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
NDUFA4O00483 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms