Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC135050.7-201ENST00000624508 2218 ntBASIC19.65■□□□□ 0.74
O00370 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.65■□□□□ 0.74
O00370 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
O00370 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
O00370 AL390961.4-201ENST00000623958 2535 ntBASIC19.65■□□□□ 0.74
O00370 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
O00370 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
O00370 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
O00370 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
O00370 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
O00370 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
O00370 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
O00370 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.65■□□□□ 0.74
O00370 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.65■□□□□ 0.74
O00370 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
O00370 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.65■□□□□ 0.74
O00370 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
O00370 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
O00370 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
O00370 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.64■□□□□ 0.73
O00370 AC117947.1-201ENST00000427448 529 ntBASIC19.64■□□□□ 0.73
O00370 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.64■□□□□ 0.73
O00370 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
O00370 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
O00370 AC139887.4-201ENST00000607877 719 ntBASIC19.64■□□□□ 0.73
O00370 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
O00370 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.64■□□□□ 0.73
O00370 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
O00370 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
O00370 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.64■□□□□ 0.73
O00370 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
O00370 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
O00370 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
O00370 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.64■□□□□ 0.73
O00370 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.64■□□□□ 0.73
O00370 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.64■□□□□ 0.73
O00370 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
O00370 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
O00370 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
O00370 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
O00370 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
O00370 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.63■□□□□ 0.73
O00370 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.63■□□□□ 0.73
O00370 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.63■□□□□ 0.73
O00370 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.63■□□□□ 0.73
O00370 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
O00370 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.63■□□□□ 0.73
O00370 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
O00370 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
O00370 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
O00370 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.63■□□□□ 0.73
O00370 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
O00370 AC073592.3-201ENST00000625118 1834 ntBASIC19.63■□□□□ 0.73
O00370 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
O00370 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
O00370 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
O00370 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.63■□□□□ 0.73
O00370 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
O00370 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
O00370 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.63■□□□□ 0.73
O00370 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
O00370 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
O00370 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
O00370 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.63■□□□□ 0.73
O00370 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.63■□□□□ 0.73
O00370 YBX1P2-201ENST00000489612 999 ntBASIC19.63■□□□□ 0.73
O00370 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.63■□□□□ 0.73
O00370 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.63■□□□□ 0.73
O00370 GCSHP2-201ENST00000560971 527 ntBASIC19.63■□□□□ 0.73
O00370 AL441883.1-201ENST00000566170 1045 ntBASIC19.63■□□□□ 0.73
O00370 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
O00370 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
O00370 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
O00370 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
O00370 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.63■□□□□ 0.73
O00370 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
O00370 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
O00370 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
O00370 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
O00370 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
O00370 AC018470.1-201ENST00000624790 3129 ntBASIC19.62■□□□□ 0.73
O00370 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
O00370 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
O00370 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.62■□□□□ 0.73
O00370 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
O00370 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
O00370 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
O00370 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.62■□□□□ 0.73
O00370 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.62■□□□□ 0.73
O00370 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
O00370 AC011558.1-201ENST00000623459 338 ntBASIC19.62■□□□□ 0.73
O00370 BICD1-207ENST00000551848 1962 ntBASIC19.62■□□□□ 0.73
O00370 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
O00370 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.62■□□□□ 0.73
O00370 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
O00370 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
O00370 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
O00370 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
O00370 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.62■□□□□ 0.73
O00370 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms