Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RCCD1A6NED2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.59■□□□□ 0.73
RCCD1A6NED2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RCCD1A6NED2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RCCD1A6NED2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.59■□□□□ 0.73
RCCD1A6NED2 AP000692.2-201ENST00000608391 879 ntBASIC19.59■□□□□ 0.73
RCCD1A6NED2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.59■□□□□ 0.73
RCCD1A6NED2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RCCD1A6NED2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.59■□□□□ 0.73
RCCD1A6NED2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RCCD1A6NED2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RCCD1A6NED2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.59■□□□□ 0.73
RCCD1A6NED2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RCCD1A6NED2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RCCD1A6NED2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RCCD1A6NED2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RCCD1A6NED2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RCCD1A6NED2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RCCD1A6NED2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RCCD1A6NED2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RCCD1A6NED2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RCCD1A6NED2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.58■□□□□ 0.73
RCCD1A6NED2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RCCD1A6NED2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.58■□□□□ 0.73
RCCD1A6NED2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RCCD1A6NED2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RCCD1A6NED2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RCCD1A6NED2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RCCD1A6NED2 AP000593.1-201ENST00000393668 712 ntBASIC19.58■□□□□ 0.72
RCCD1A6NED2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RCCD1A6NED2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
RCCD1A6NED2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
RCCD1A6NED2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
RCCD1A6NED2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RCCD1A6NED2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RCCD1A6NED2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RCCD1A6NED2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RCCD1A6NED2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RCCD1A6NED2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RCCD1A6NED2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.57■□□□□ 0.72
RCCD1A6NED2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RCCD1A6NED2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RCCD1A6NED2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RCCD1A6NED2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.57■□□□□ 0.72
RCCD1A6NED2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RCCD1A6NED2 AC141586.5-201ENST00000624546 2050 ntBASIC19.57■□□□□ 0.72
RCCD1A6NED2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RCCD1A6NED2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.57■□□□□ 0.72
RCCD1A6NED2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.57■□□□□ 0.72
RCCD1A6NED2 AC128676.1-201ENST00000454392 318 ntBASIC19.57■□□□□ 0.72
RCCD1A6NED2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RCCD1A6NED2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.57■□□□□ 0.72
RCCD1A6NED2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RCCD1A6NED2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.57■□□□□ 0.72
RCCD1A6NED2 AC073195.1-201ENST00000607241 877 ntBASIC19.57■□□□□ 0.72
RCCD1A6NED2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RCCD1A6NED2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RCCD1A6NED2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RCCD1A6NED2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.57■□□□□ 0.72
RCCD1A6NED2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.57■□□□□ 0.72
RCCD1A6NED2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
RCCD1A6NED2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RCCD1A6NED2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.57■□□□□ 0.72
RCCD1A6NED2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RCCD1A6NED2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.57■□□□□ 0.72
RCCD1A6NED2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RCCD1A6NED2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RCCD1A6NED2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RCCD1A6NED2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RCCD1A6NED2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RCCD1A6NED2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RCCD1A6NED2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RCCD1A6NED2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RCCD1A6NED2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RCCD1A6NED2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
RCCD1A6NED2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.56■□□□□ 0.72
RCCD1A6NED2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RCCD1A6NED2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.56■□□□□ 0.72
RCCD1A6NED2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RCCD1A6NED2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RCCD1A6NED2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RCCD1A6NED2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
RCCD1A6NED2 AC034236.2-201ENST00000606662 1610 ntBASIC19.56■□□□□ 0.72
RCCD1A6NED2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.56■□□□□ 0.72
RCCD1A6NED2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RCCD1A6NED2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RCCD1A6NED2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RCCD1A6NED2 AL353807.1-201ENST00000427475 662 ntBASIC19.56■□□□□ 0.72
RCCD1A6NED2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.56■□□□□ 0.72
RCCD1A6NED2 MCCD1P1-208ENST00000445732 328 ntBASIC19.56■□□□□ 0.72
RCCD1A6NED2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.56■□□□□ 0.72
RCCD1A6NED2 C1QBPP2-201ENST00000528754 825 ntBASIC19.56■□□□□ 0.72
RCCD1A6NED2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.56■□□□□ 0.72
RCCD1A6NED2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.56■□□□□ 0.72
RCCD1A6NED2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.56■□□□□ 0.72
RCCD1A6NED2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.56■□□□□ 0.72
RCCD1A6NED2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.56■□□□□ 0.72
RCCD1A6NED2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RCCD1A6NED2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
RCCD1A6NED2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms