Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.16■□□□□ 0.02
A0A1W2PRF3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.16■□□□□ 0.02
A0A1W2PRF3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
A0A1W2PRF3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.16■□□□□ 0.02
A0A1W2PRF3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.16■□□□□ 0.02
A0A1W2PRF3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.16■□□□□ 0.02
A0A1W2PRF3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
A0A1W2PRF3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
A0A1W2PRF3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
A0A1W2PRF3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.16■□□□□ 0.02
A0A1W2PRF3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
A0A1W2PRF3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.16■□□□□ 0.02
A0A1W2PRF3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
A0A1W2PRF3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.16■□□□□ 0.02
A0A1W2PRF3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
A0A1W2PRF3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
A0A1W2PRF3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
A0A1W2PRF3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 AC006333.2-201ENST00000607957 2099 ntBASIC15.15■□□□□ 0.02
A0A1W2PRF3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.15■□□□□ 0.02
A0A1W2PRF3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 FAM8A6P-201ENST00000407496 1135 ntBASIC15.15■□□□□ 0.02
A0A1W2PRF3 AL671277.2-201ENST00000458060 996 ntBASIC15.15■□□□□ 0.02
A0A1W2PRF3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.15■□□□□ 0.02
A0A1W2PRF3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.15■□□□□ 0.02
A0A1W2PRF3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.15■□□□□ 0.02
A0A1W2PRF3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.15■□□□□ 0.02
A0A1W2PRF3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
A0A1W2PRF3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
A0A1W2PRF3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 AP000974.1-201ENST00000623909 2387 ntBASIC15.15■□□□□ 0.02
A0A1W2PRF3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
A0A1W2PRF3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
A0A1W2PRF3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.15■□□□□ 0.02
A0A1W2PRF3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.15■□□□□ 0.02
A0A1W2PRF3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
A0A1W2PRF3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.15■□□□□ 0.02
A0A1W2PRF3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.15■□□□□ 0.02
A0A1W2PRF3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.15■□□□□ 0.02
A0A1W2PRF3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
A0A1W2PRF3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.02
A0A1W2PRF3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
A0A1W2PRF3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
A0A1W2PRF3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
A0A1W2PRF3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
A0A1W2PRF3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
A0A1W2PRF3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
A0A1W2PRF3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
A0A1W2PRF3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
A0A1W2PRF3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
A0A1W2PRF3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
A0A1W2PRF3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
A0A1W2PRF3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
A0A1W2PRF3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
A0A1W2PRF3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
A0A1W2PRF3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.14■□□□□ 0.01
A0A1W2PRF3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
A0A1W2PRF3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
A0A1W2PRF3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.14■□□□□ 0.01
A0A1W2PRF3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.14■□□□□ 0.01
A0A1W2PRF3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.14■□□□□ 0.01
A0A1W2PRF3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.14■□□□□ 0.01
A0A1W2PRF3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.14■□□□□ 0.01
A0A1W2PRF3 AL157888.1-201ENST00000631930 593 ntBASIC15.14■□□□□ 0.01
A0A1W2PRF3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
A0A1W2PRF3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
A0A1W2PRF3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
A0A1W2PRF3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.14■□□□□ 0.01
A0A1W2PRF3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
A0A1W2PRF3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
A0A1W2PRF3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
A0A1W2PRF3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
A0A1W2PRF3 Z98044.1-201ENST00000632503 1764 ntBASIC15.13■□□□□ 0.01
A0A1W2PRF3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
A0A1W2PRF3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
A0A1W2PRF3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
A0A1W2PRF3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
A0A1W2PRF3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
A0A1W2PRF3 MTMR9LP-203ENST00000426597 1545 ntBASIC15.13■□□□□ 0.01
A0A1W2PRF3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.13■□□□□ 0.01
A0A1W2PRF3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms