Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 HMGA1P5-201ENST00000412453 271 ntBASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC104390.1-201ENST00000555663 520 ntBASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 REXO1L9P-201ENST00000604264 2108 ntBASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC005332.8-201ENST00000622750 2735 ntBASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.27■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.27■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.27■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 GMCL1P1-201ENST00000463439 1581 ntBASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 PHGDH-209ENST00000641074 1780 ntBASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 MIR149-201ENST00000384879 89 ntBASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 SEC1P-202ENST00000473944 940 ntBASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 AC145285.6-201ENST00000604632 637 ntBASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 AC024243.1-201ENST00000609234 778 ntBASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 AC068880.1-201ENST00000507289 2297 ntBASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms