Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
TNFRSF11AQ9Y6Q6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
TNFRSF11AQ9Y6Q6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.92■■■□□ 2.54
TNFRSF11AQ9Y6Q6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
TNFRSF11AQ9Y6Q6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
TNFRSF11AQ9Y6Q6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
TNFRSF11AQ9Y6Q6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.91■■■□□ 2.54
TNFRSF11AQ9Y6Q6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC30.91■■■□□ 2.54
TNFRSF11AQ9Y6Q6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
TNFRSF11AQ9Y6Q6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
TNFRSF11AQ9Y6Q6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.9■■■□□ 2.54
TNFRSF11AQ9Y6Q6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
TNFRSF11AQ9Y6Q6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
TNFRSF11AQ9Y6Q6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
TNFRSF11AQ9Y6Q6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
TNFRSF11AQ9Y6Q6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.89■■■□□ 2.54
TNFRSF11AQ9Y6Q6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
TNFRSF11AQ9Y6Q6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
TNFRSF11AQ9Y6Q6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30.88■■■□□ 2.53
TNFRSF11AQ9Y6Q6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
TNFRSF11AQ9Y6Q6 GPX1-201ENST00000419349 1106 ntBASIC30.87■■■□□ 2.53
TNFRSF11AQ9Y6Q6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
TNFRSF11AQ9Y6Q6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
TNFRSF11AQ9Y6Q6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
TNFRSF11AQ9Y6Q6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.85■■■□□ 2.53
TNFRSF11AQ9Y6Q6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
TNFRSF11AQ9Y6Q6 AC060814.1-201ENST00000554326 538 ntBASIC30.85■■■□□ 2.53
TNFRSF11AQ9Y6Q6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.85■■■□□ 2.53
TNFRSF11AQ9Y6Q6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
TNFRSF11AQ9Y6Q6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
TNFRSF11AQ9Y6Q6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
TNFRSF11AQ9Y6Q6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.84■■■□□ 2.53
TNFRSF11AQ9Y6Q6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC30.84■■■□□ 2.53
TNFRSF11AQ9Y6Q6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
TNFRSF11AQ9Y6Q6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.83■■■□□ 2.53
TNFRSF11AQ9Y6Q6 LINC01003-201ENST00000564834 1764 ntBASIC30.83■■■□□ 2.53
TNFRSF11AQ9Y6Q6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
TNFRSF11AQ9Y6Q6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
TNFRSF11AQ9Y6Q6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.53
TNFRSF11AQ9Y6Q6 AC022413.1-201ENST00000624602 984 ntBASIC30.82■■■□□ 2.52
TNFRSF11AQ9Y6Q6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
TNFRSF11AQ9Y6Q6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
TNFRSF11AQ9Y6Q6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.81■■■□□ 2.52
TNFRSF11AQ9Y6Q6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.81■■■□□ 2.52
TNFRSF11AQ9Y6Q6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC30.81■■■□□ 2.52
TNFRSF11AQ9Y6Q6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.81■■■□□ 2.52
TNFRSF11AQ9Y6Q6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
TNFRSF11AQ9Y6Q6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.81■■■□□ 2.52
TNFRSF11AQ9Y6Q6 AC142086.6-201ENST00000621154 1765 ntBASIC30.81■■■□□ 2.52
TNFRSF11AQ9Y6Q6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
TNFRSF11AQ9Y6Q6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
TNFRSF11AQ9Y6Q6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
TNFRSF11AQ9Y6Q6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC30.8■■■□□ 2.52
TNFRSF11AQ9Y6Q6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
TNFRSF11AQ9Y6Q6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
TNFRSF11AQ9Y6Q6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.78■■■□□ 2.52
TNFRSF11AQ9Y6Q6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC30.76■■■□□ 2.51
TNFRSF11AQ9Y6Q6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.76■■■□□ 2.51
TNFRSF11AQ9Y6Q6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
TNFRSF11AQ9Y6Q6 AL157400.5-201ENST00000507624 621 ntBASIC30.75■■■□□ 2.51
TNFRSF11AQ9Y6Q6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
TNFRSF11AQ9Y6Q6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
TNFRSF11AQ9Y6Q6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
TNFRSF11AQ9Y6Q6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
TNFRSF11AQ9Y6Q6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
TNFRSF11AQ9Y6Q6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC30.72■■■□□ 2.51
TNFRSF11AQ9Y6Q6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC30.72■■■□□ 2.51
TNFRSF11AQ9Y6Q6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
TNFRSF11AQ9Y6Q6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.71■■■□□ 2.51
TNFRSF11AQ9Y6Q6 AC092296.2-201ENST00000589470 999 ntBASIC30.71■■■□□ 2.51
TNFRSF11AQ9Y6Q6 AL359258.2-201ENST00000564063 1566 ntBASIC30.71■■■□□ 2.51
TNFRSF11AQ9Y6Q6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
TNFRSF11AQ9Y6Q6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
TNFRSF11AQ9Y6Q6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
TNFRSF11AQ9Y6Q6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.7■■■□□ 2.51
TNFRSF11AQ9Y6Q6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
TNFRSF11AQ9Y6Q6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
TNFRSF11AQ9Y6Q6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
TNFRSF11AQ9Y6Q6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.69■■■□□ 2.5
TNFRSF11AQ9Y6Q6 BX255925.1-201ENST00000566954 1854 ntBASIC30.68■■■□□ 2.5
TNFRSF11AQ9Y6Q6 RARRES2P2-201ENST00000394842 485 ntBASIC30.68■■■□□ 2.5
TNFRSF11AQ9Y6Q6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
TNFRSF11AQ9Y6Q6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
TNFRSF11AQ9Y6Q6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.67■■■□□ 2.5
TNFRSF11AQ9Y6Q6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TNFRSF11AQ9Y6Q6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TNFRSF11AQ9Y6Q6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
TNFRSF11AQ9Y6Q6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
TNFRSF11AQ9Y6Q6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TNFRSF11AQ9Y6Q6 RNF126P1-201ENST00000567452 1320 ntBASIC30.66■■■□□ 2.5
TNFRSF11AQ9Y6Q6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC30.66■■■□□ 2.5
TNFRSF11AQ9Y6Q6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
TNFRSF11AQ9Y6Q6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC30.65■■■□□ 2.5
TNFRSF11AQ9Y6Q6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.65■■■□□ 2.5
TNFRSF11AQ9Y6Q6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
TNFRSF11AQ9Y6Q6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
TNFRSF11AQ9Y6Q6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
TNFRSF11AQ9Y6Q6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.64■■■□□ 2.5
TNFRSF11AQ9Y6Q6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
TNFRSF11AQ9Y6Q6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms