Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDHGB3Q9Y5G1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
PCDHGB3Q9Y5G1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGB3Q9Y5G1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGB3Q9Y5G1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGB3Q9Y5G1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGB3Q9Y5G1 MIR4449-201ENST00000578365 66 ntBASIC23.51■■□□□ 1.35
PCDHGB3Q9Y5G1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.51■■□□□ 1.35
PCDHGB3Q9Y5G1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGB3Q9Y5G1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
PCDHGB3Q9Y5G1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
PCDHGB3Q9Y5G1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGB3Q9Y5G1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGB3Q9Y5G1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGB3Q9Y5G1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGB3Q9Y5G1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGB3Q9Y5G1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.49■■□□□ 1.35
PCDHGB3Q9Y5G1 AC018358.1-201ENST00000631079 1402 ntBASIC23.49■■□□□ 1.35
PCDHGB3Q9Y5G1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGB3Q9Y5G1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
PCDHGB3Q9Y5G1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
PCDHGB3Q9Y5G1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGB3Q9Y5G1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGB3Q9Y5G1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGB3Q9Y5G1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.48■■□□□ 1.35
PCDHGB3Q9Y5G1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDHGB3Q9Y5G1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGB3Q9Y5G1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGB3Q9Y5G1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
PCDHGB3Q9Y5G1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.47■■□□□ 1.35
PCDHGB3Q9Y5G1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.47■■□□□ 1.35
PCDHGB3Q9Y5G1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGB3Q9Y5G1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.46■■□□□ 1.35
PCDHGB3Q9Y5G1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGB3Q9Y5G1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGB3Q9Y5G1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGB3Q9Y5G1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGB3Q9Y5G1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.45■■□□□ 1.34
PCDHGB3Q9Y5G1 AC016575.1-201ENST00000607026 382 ntBASIC23.45■■□□□ 1.34
PCDHGB3Q9Y5G1 CR559946.2-201ENST00000623684 991 ntBASIC23.45■■□□□ 1.34
PCDHGB3Q9Y5G1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGB3Q9Y5G1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.45■■□□□ 1.34
PCDHGB3Q9Y5G1 AC110285.7-201ENST00000624417 1536 ntBASIC23.44■■□□□ 1.34
PCDHGB3Q9Y5G1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGB3Q9Y5G1 DUX4L13-201ENST00000554103 1267 ntBASIC23.44■■□□□ 1.34
PCDHGB3Q9Y5G1 DUX4L15-201ENST00000611059 1267 ntBASIC23.44■■□□□ 1.34
PCDHGB3Q9Y5G1 DUX4L23-201ENST00000615195 1269 ntBASIC23.44■■□□□ 1.34
PCDHGB3Q9Y5G1 DUX4L24-201ENST00000617576 1269 ntBASIC23.44■■□□□ 1.34
PCDHGB3Q9Y5G1 DUX4L22-201ENST00000618238 1269 ntBASIC23.44■■□□□ 1.34
PCDHGB3Q9Y5G1 DUX4L20-201ENST00000619712 1269 ntBASIC23.44■■□□□ 1.34
PCDHGB3Q9Y5G1 DUX4L21-201ENST00000622058 1269 ntBASIC23.44■■□□□ 1.34
PCDHGB3Q9Y5G1 DUX4L10-201ENST00000622460 1267 ntBASIC23.44■■□□□ 1.34
PCDHGB3Q9Y5G1 DUX4L25-201ENST00000624915 1269 ntBASIC23.44■■□□□ 1.34
PCDHGB3Q9Y5G1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.43■■□□□ 1.34
PCDHGB3Q9Y5G1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGB3Q9Y5G1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGB3Q9Y5G1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.43■■□□□ 1.34
PCDHGB3Q9Y5G1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGB3Q9Y5G1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGB3Q9Y5G1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
PCDHGB3Q9Y5G1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGB3Q9Y5G1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGB3Q9Y5G1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGB3Q9Y5G1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.41■■□□□ 1.34
PCDHGB3Q9Y5G1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGB3Q9Y5G1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGB3Q9Y5G1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGB3Q9Y5G1 AC135731.1-201ENST00000569415 2548 ntBASIC23.4■■□□□ 1.34
PCDHGB3Q9Y5G1 AL449106.1-201ENST00000608517 1980 ntBASIC23.4■■□□□ 1.34
PCDHGB3Q9Y5G1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.4■■□□□ 1.34
PCDHGB3Q9Y5G1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
PCDHGB3Q9Y5G1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
PCDHGB3Q9Y5G1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGB3Q9Y5G1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGB3Q9Y5G1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
PCDHGB3Q9Y5G1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.39■■□□□ 1.33
PCDHGB3Q9Y5G1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGB3Q9Y5G1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.39■■□□□ 1.33
PCDHGB3Q9Y5G1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGB3Q9Y5G1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGB3Q9Y5G1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGB3Q9Y5G1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGB3Q9Y5G1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGB3Q9Y5G1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGB3Q9Y5G1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGB3Q9Y5G1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGB3Q9Y5G1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
PCDHGB3Q9Y5G1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGB3Q9Y5G1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGB3Q9Y5G1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
PCDHGB3Q9Y5G1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGB3Q9Y5G1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
PCDHGB3Q9Y5G1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGB3Q9Y5G1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGB3Q9Y5G1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
PCDHGB3Q9Y5G1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGB3Q9Y5G1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDHGB3Q9Y5G1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGB3Q9Y5G1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGB3Q9Y5G1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms