Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LINC00588Q9Y4M8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LINC00588Q9Y4M8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00588Q9Y4M8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.18■□□□□ 0.34
LINC00588Q9Y4M8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.18■□□□□ 0.34
LINC00588Q9Y4M8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00588Q9Y4M8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00588Q9Y4M8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC17.17■□□□□ 0.34
LINC00588Q9Y4M8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC17.17■□□□□ 0.34
LINC00588Q9Y4M8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.17■□□□□ 0.34
LINC00588Q9Y4M8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.17■□□□□ 0.34
LINC00588Q9Y4M8 ECEL1P2-201ENST00000461596 1295 ntBASIC17.17■□□□□ 0.34
LINC00588Q9Y4M8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00588Q9Y4M8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.17■□□□□ 0.34
LINC00588Q9Y4M8 AC018358.1-201ENST00000631079 1402 ntBASIC17.17■□□□□ 0.34
LINC00588Q9Y4M8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00588Q9Y4M8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00588Q9Y4M8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00588Q9Y4M8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00588Q9Y4M8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00588Q9Y4M8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC17.16■□□□□ 0.34
LINC00588Q9Y4M8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.16■□□□□ 0.34
LINC00588Q9Y4M8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00588Q9Y4M8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
LINC00588Q9Y4M8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00588Q9Y4M8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00588Q9Y4M8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00588Q9Y4M8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LINC00588Q9Y4M8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LINC00588Q9Y4M8 AL157400.5-201ENST00000507624 621 ntBASIC17.15■□□□□ 0.34
LINC00588Q9Y4M8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00588Q9Y4M8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
LINC00588Q9Y4M8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00588Q9Y4M8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.14■□□□□ 0.33
LINC00588Q9Y4M8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00588Q9Y4M8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00588Q9Y4M8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00588Q9Y4M8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC00588Q9Y4M8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00588Q9Y4M8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC00588Q9Y4M8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC00588Q9Y4M8 DRD5P2-201ENST00000421395 2012 ntBASIC17.13■□□□□ 0.33
LINC00588Q9Y4M8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LINC00588Q9Y4M8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00588Q9Y4M8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00588Q9Y4M8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LINC00588Q9Y4M8 NTF6A-201ENST00000591175 560 ntBASIC17.12■□□□□ 0.33
LINC00588Q9Y4M8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC17.12■□□□□ 0.33
LINC00588Q9Y4M8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LINC00588Q9Y4M8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.12■□□□□ 0.33
LINC00588Q9Y4M8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00588Q9Y4M8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00588Q9Y4M8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00588Q9Y4M8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LINC00588Q9Y4M8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00588Q9Y4M8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
LINC00588Q9Y4M8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00588Q9Y4M8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00588Q9Y4M8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00588Q9Y4M8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.1■□□□□ 0.33
LINC00588Q9Y4M8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00588Q9Y4M8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.1■□□□□ 0.33
LINC00588Q9Y4M8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.1■□□□□ 0.33
LINC00588Q9Y4M8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00588Q9Y4M8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00588Q9Y4M8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00588Q9Y4M8 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.09■□□□□ 0.33
LINC00588Q9Y4M8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC00588Q9Y4M8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00588Q9Y4M8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.08■□□□□ 0.32
LINC00588Q9Y4M8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
LINC00588Q9Y4M8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00588Q9Y4M8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00588Q9Y4M8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00588Q9Y4M8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC17.07■□□□□ 0.32
LINC00588Q9Y4M8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00588Q9Y4M8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00588Q9Y4M8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00588Q9Y4M8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LINC00588Q9Y4M8 U85056.1-201ENST00000616429 682 ntBASIC17.07■□□□□ 0.32
LINC00588Q9Y4M8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00588Q9Y4M8 SMPD5-203ENST00000639008 1464 ntBASIC17.06■□□□□ 0.32
LINC00588Q9Y4M8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LINC00588Q9Y4M8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.06■□□□□ 0.32
LINC00588Q9Y4M8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00588Q9Y4M8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00588Q9Y4M8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.06■□□□□ 0.32
LINC00588Q9Y4M8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LINC00588Q9Y4M8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.05■□□□□ 0.32
LINC00588Q9Y4M8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.05■□□□□ 0.32
LINC00588Q9Y4M8 AC007029.1-201ENST00000604183 313 ntBASIC17.05■□□□□ 0.32
LINC00588Q9Y4M8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00588Q9Y4M8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00588Q9Y4M8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00588Q9Y4M8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LINC00588Q9Y4M8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00588Q9Y4M8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00588Q9Y4M8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00588Q9Y4M8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.04■□□□□ 0.32
LINC00588Q9Y4M8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms