Protein–RNA interactions for Protein: Q9UNN4

GTF2A1L, TFIIA-alpha and beta-like factor, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1LQ9UNN4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.01■■□□□ 1.11
GTF2A1LQ9UNN4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
GTF2A1LQ9UNN4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
GTF2A1LQ9UNN4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
GTF2A1LQ9UNN4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22■■□□□ 1.11
GTF2A1LQ9UNN4 AP006261.1-201ENST00000584783 668 ntBASIC22■■□□□ 1.11
GTF2A1LQ9UNN4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GTF2A1LQ9UNN4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
GTF2A1LQ9UNN4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
GTF2A1LQ9UNN4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
GTF2A1LQ9UNN4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
GTF2A1LQ9UNN4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
GTF2A1LQ9UNN4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.98■■□□□ 1.11
GTF2A1LQ9UNN4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
GTF2A1LQ9UNN4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
GTF2A1LQ9UNN4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
GTF2A1LQ9UNN4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
GTF2A1LQ9UNN4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.97■■□□□ 1.11
GTF2A1LQ9UNN4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
GTF2A1LQ9UNN4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GTF2A1LQ9UNN4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.96■■□□□ 1.11
GTF2A1LQ9UNN4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
GTF2A1LQ9UNN4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.95■■□□□ 1.1
GTF2A1LQ9UNN4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GTF2A1LQ9UNN4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GTF2A1LQ9UNN4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.95■■□□□ 1.1
GTF2A1LQ9UNN4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GTF2A1LQ9UNN4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GTF2A1LQ9UNN4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.94■■□□□ 1.1
GTF2A1LQ9UNN4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.94■■□□□ 1.1
GTF2A1LQ9UNN4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.94■■□□□ 1.1
GTF2A1LQ9UNN4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GTF2A1LQ9UNN4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
GTF2A1LQ9UNN4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
GTF2A1LQ9UNN4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
GTF2A1LQ9UNN4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.93■■□□□ 1.1
GTF2A1LQ9UNN4 AL449106.1-201ENST00000608517 1980 ntBASIC21.93■■□□□ 1.1
GTF2A1LQ9UNN4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
GTF2A1LQ9UNN4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.92■■□□□ 1.1
GTF2A1LQ9UNN4 AC087741.3-201ENST00000624270 1347 ntBASIC21.92■■□□□ 1.1
GTF2A1LQ9UNN4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GTF2A1LQ9UNN4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
GTF2A1LQ9UNN4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GTF2A1LQ9UNN4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.92■■□□□ 1.1
GTF2A1LQ9UNN4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GTF2A1LQ9UNN4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GTF2A1LQ9UNN4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GTF2A1LQ9UNN4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.91■■□□□ 1.1
GTF2A1LQ9UNN4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GTF2A1LQ9UNN4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GTF2A1LQ9UNN4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GTF2A1LQ9UNN4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
GTF2A1LQ9UNN4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GTF2A1LQ9UNN4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
GTF2A1LQ9UNN4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
GTF2A1LQ9UNN4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
GTF2A1LQ9UNN4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
GTF2A1LQ9UNN4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
GTF2A1LQ9UNN4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.89■■□□□ 1.09
GTF2A1LQ9UNN4 AL162393.1-201ENST00000437852 946 ntBASIC21.89■■□□□ 1.09
GTF2A1LQ9UNN4 AC044849.2-201ENST00000606596 710 ntBASIC21.89■■□□□ 1.09
GTF2A1LQ9UNN4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.89■■□□□ 1.09
GTF2A1LQ9UNN4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
GTF2A1LQ9UNN4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
GTF2A1LQ9UNN4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
GTF2A1LQ9UNN4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GTF2A1LQ9UNN4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GTF2A1LQ9UNN4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.88■■□□□ 1.09
GTF2A1LQ9UNN4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
GTF2A1LQ9UNN4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
GTF2A1LQ9UNN4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.87■■□□□ 1.09
GTF2A1LQ9UNN4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GTF2A1LQ9UNN4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.87■■□□□ 1.09
GTF2A1LQ9UNN4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.87■■□□□ 1.09
GTF2A1LQ9UNN4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
GTF2A1LQ9UNN4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
GTF2A1LQ9UNN4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.87■■□□□ 1.09
GTF2A1LQ9UNN4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
GTF2A1LQ9UNN4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.86■■□□□ 1.09
GTF2A1LQ9UNN4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
GTF2A1LQ9UNN4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
GTF2A1LQ9UNN4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.86■■□□□ 1.09
GTF2A1LQ9UNN4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
GTF2A1LQ9UNN4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
GTF2A1LQ9UNN4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
GTF2A1LQ9UNN4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
GTF2A1LQ9UNN4 AC110285.7-201ENST00000624417 1536 ntBASIC21.85■■□□□ 1.09
GTF2A1LQ9UNN4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
GTF2A1LQ9UNN4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
GTF2A1LQ9UNN4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.84■■□□□ 1.09
GTF2A1LQ9UNN4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.84■■□□□ 1.09
GTF2A1LQ9UNN4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
GTF2A1LQ9UNN4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
GTF2A1LQ9UNN4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.83■■□□□ 1.09
GTF2A1LQ9UNN4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.83■■□□□ 1.09
GTF2A1LQ9UNN4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
GTF2A1LQ9UNN4 AC091060.1-201ENST00000623524 1766 ntBASIC21.83■■□□□ 1.09
GTF2A1LQ9UNN4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
GTF2A1LQ9UNN4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GTF2A1LQ9UNN4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms