Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.93■■□□□ 1.26
POLR2J3Q9H1A7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.93■■□□□ 1.26
POLR2J3Q9H1A7 AC091060.1-201ENST00000623524 1766 ntBASIC22.93■■□□□ 1.26
POLR2J3Q9H1A7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
POLR2J3Q9H1A7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.92■■□□□ 1.26
POLR2J3Q9H1A7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
POLR2J3Q9H1A7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
POLR2J3Q9H1A7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
POLR2J3Q9H1A7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.91■■□□□ 1.26
POLR2J3Q9H1A7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
POLR2J3Q9H1A7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
POLR2J3Q9H1A7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
POLR2J3Q9H1A7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
POLR2J3Q9H1A7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
POLR2J3Q9H1A7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.89■■□□□ 1.26
POLR2J3Q9H1A7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.89■■□□□ 1.26
POLR2J3Q9H1A7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
POLR2J3Q9H1A7 AC110285.7-201ENST00000624417 1536 ntBASIC22.89■■□□□ 1.26
POLR2J3Q9H1A7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
POLR2J3Q9H1A7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
POLR2J3Q9H1A7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.89■■□□□ 1.25
POLR2J3Q9H1A7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
POLR2J3Q9H1A7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
POLR2J3Q9H1A7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
POLR2J3Q9H1A7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
POLR2J3Q9H1A7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
POLR2J3Q9H1A7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
POLR2J3Q9H1A7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.88■■□□□ 1.25
POLR2J3Q9H1A7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
POLR2J3Q9H1A7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.88■■□□□ 1.25
POLR2J3Q9H1A7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.87■■□□□ 1.25
POLR2J3Q9H1A7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
POLR2J3Q9H1A7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
POLR2J3Q9H1A7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.87■■□□□ 1.25
POLR2J3Q9H1A7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
POLR2J3Q9H1A7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
POLR2J3Q9H1A7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
POLR2J3Q9H1A7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
POLR2J3Q9H1A7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.86■■□□□ 1.25
POLR2J3Q9H1A7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
POLR2J3Q9H1A7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.86■■□□□ 1.25
POLR2J3Q9H1A7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
POLR2J3Q9H1A7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.85■■□□□ 1.25
POLR2J3Q9H1A7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
POLR2J3Q9H1A7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
POLR2J3Q9H1A7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
POLR2J3Q9H1A7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.84■■□□□ 1.25
POLR2J3Q9H1A7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
POLR2J3Q9H1A7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.83■■□□□ 1.25
POLR2J3Q9H1A7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
POLR2J3Q9H1A7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.83■■□□□ 1.25
POLR2J3Q9H1A7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
POLR2J3Q9H1A7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.82■■□□□ 1.24
POLR2J3Q9H1A7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
POLR2J3Q9H1A7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
POLR2J3Q9H1A7 AC145676.1-201ENST00000514988 2004 ntBASIC22.82■■□□□ 1.24
POLR2J3Q9H1A7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
POLR2J3Q9H1A7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
POLR2J3Q9H1A7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
POLR2J3Q9H1A7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
POLR2J3Q9H1A7 DUX4L29-201ENST00000425409 679 ntBASIC22.81■■□□□ 1.24
POLR2J3Q9H1A7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
POLR2J3Q9H1A7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
POLR2J3Q9H1A7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
POLR2J3Q9H1A7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
POLR2J3Q9H1A7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
POLR2J3Q9H1A7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
POLR2J3Q9H1A7 AC021231.2-201ENST00000594613 730 ntBASIC22.8■■□□□ 1.24
POLR2J3Q9H1A7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
POLR2J3Q9H1A7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.79■■□□□ 1.24
POLR2J3Q9H1A7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.79■■□□□ 1.24
POLR2J3Q9H1A7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.78■■□□□ 1.24
POLR2J3Q9H1A7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
POLR2J3Q9H1A7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.78■■□□□ 1.24
POLR2J3Q9H1A7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.78■■□□□ 1.24
POLR2J3Q9H1A7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.78■■□□□ 1.24
POLR2J3Q9H1A7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.78■■□□□ 1.24
POLR2J3Q9H1A7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.78■■□□□ 1.24
POLR2J3Q9H1A7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
POLR2J3Q9H1A7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
POLR2J3Q9H1A7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
POLR2J3Q9H1A7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.77■■□□□ 1.23
POLR2J3Q9H1A7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
POLR2J3Q9H1A7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
POLR2J3Q9H1A7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.76■■□□□ 1.23
POLR2J3Q9H1A7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
POLR2J3Q9H1A7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.75■■□□□ 1.23
POLR2J3Q9H1A7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.75■■□□□ 1.23
POLR2J3Q9H1A7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.75■■□□□ 1.23
POLR2J3Q9H1A7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
POLR2J3Q9H1A7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
POLR2J3Q9H1A7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.74■■□□□ 1.23
POLR2J3Q9H1A7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
POLR2J3Q9H1A7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
POLR2J3Q9H1A7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
POLR2J3Q9H1A7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
POLR2J3Q9H1A7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
POLR2J3Q9H1A7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.73■■□□□ 1.23
POLR2J3Q9H1A7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
POLR2J3Q9H1A7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms