Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC32.18■■■□□ 2.74
CNTNAP4Q9C0A0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC32.18■■■□□ 2.74
CNTNAP4Q9C0A0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC32.17■■■□□ 2.74
CNTNAP4Q9C0A0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC32.17■■■□□ 2.74
CNTNAP4Q9C0A0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CNTNAP4Q9C0A0 DUX4L9-201ENST00000449051 1259 ntBASIC32.17■■■□□ 2.74
CNTNAP4Q9C0A0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC32.17■■■□□ 2.74
CNTNAP4Q9C0A0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC32.17■■■□□ 2.74
CNTNAP4Q9C0A0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC32.17■■■□□ 2.74
CNTNAP4Q9C0A0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
CNTNAP4Q9C0A0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC32.16■■■□□ 2.74
CNTNAP4Q9C0A0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC32.15■■■□□ 2.74
CNTNAP4Q9C0A0 AC100797.4-201ENST00000631653 1827 ntBASIC32.15■■■□□ 2.74
CNTNAP4Q9C0A0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC32.15■■■□□ 2.74
CNTNAP4Q9C0A0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
CNTNAP4Q9C0A0 RP9P-202ENST00000450133 1212 ntBASIC32.14■■■□□ 2.74
CNTNAP4Q9C0A0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
CNTNAP4Q9C0A0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC32.14■■■□□ 2.74
CNTNAP4Q9C0A0 RAP2CP1-202ENST00000605179 643 ntBASIC32.14■■■□□ 2.74
CNTNAP4Q9C0A0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC32.13■■■□□ 2.73
CNTNAP4Q9C0A0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC32.13■■■□□ 2.73
CNTNAP4Q9C0A0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC32.12■■■□□ 2.73
CNTNAP4Q9C0A0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CNTNAP4Q9C0A0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CNTNAP4Q9C0A0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
CNTNAP4Q9C0A0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC32.11■■■□□ 2.73
CNTNAP4Q9C0A0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC32.11■■■□□ 2.73
CNTNAP4Q9C0A0 ST7-AS1-201ENST00000456775 1889 ntBASIC32.11■■■□□ 2.73
CNTNAP4Q9C0A0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC32.1■■■□□ 2.73
CNTNAP4Q9C0A0 AC093536.1-201ENST00000569153 554 ntBASIC32.1■■■□□ 2.73
CNTNAP4Q9C0A0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CNTNAP4Q9C0A0 SPCS2P3-201ENST00000500401 656 ntBASIC32.09■■■□□ 2.73
CNTNAP4Q9C0A0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC32.09■■■□□ 2.73
CNTNAP4Q9C0A0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC32.07■■■□□ 2.72
CNTNAP4Q9C0A0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
CNTNAP4Q9C0A0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC32.06■■■□□ 2.72
CNTNAP4Q9C0A0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC32.06■■■□□ 2.72
CNTNAP4Q9C0A0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CNTNAP4Q9C0A0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CNTNAP4Q9C0A0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC32.05■■■□□ 2.72
CNTNAP4Q9C0A0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
CNTNAP4Q9C0A0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC32.05■■■□□ 2.72
CNTNAP4Q9C0A0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
CNTNAP4Q9C0A0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC32.04■■■□□ 2.72
CNTNAP4Q9C0A0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
CNTNAP4Q9C0A0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC32.04■■■□□ 2.72
CNTNAP4Q9C0A0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC32.03■■■□□ 2.72
CNTNAP4Q9C0A0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CNTNAP4Q9C0A0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CNTNAP4Q9C0A0 AC010980.1-201ENST00000587192 1142 ntBASIC32.03■■■□□ 2.72
CNTNAP4Q9C0A0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC32.02■■■□□ 2.72
CNTNAP4Q9C0A0 AC074183.2-201ENST00000623112 922 ntBASIC32.02■■■□□ 2.72
CNTNAP4Q9C0A0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CNTNAP4Q9C0A0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC32.01■■■□□ 2.72
CNTNAP4Q9C0A0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC32.01■■■□□ 2.72
CNTNAP4Q9C0A0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CNTNAP4Q9C0A0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC32.01■■■□□ 2.71
CNTNAP4Q9C0A0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CNTNAP4Q9C0A0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC32■■■□□ 2.71
CNTNAP4Q9C0A0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC32■■■□□ 2.71
CNTNAP4Q9C0A0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC32■■■□□ 2.71
CNTNAP4Q9C0A0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC32■■■□□ 2.71
CNTNAP4Q9C0A0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.99■■■□□ 2.71
CNTNAP4Q9C0A0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CNTNAP4Q9C0A0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC31.99■■■□□ 2.71
CNTNAP4Q9C0A0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CNTNAP4Q9C0A0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
CNTNAP4Q9C0A0 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.98■■■□□ 2.71
CNTNAP4Q9C0A0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CNTNAP4Q9C0A0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC31.98■■■□□ 2.71
CNTNAP4Q9C0A0 BHLHE23-202ENST00000612929 1109 ntBASIC31.98■■■□□ 2.71
CNTNAP4Q9C0A0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CNTNAP4Q9C0A0 MIR3960-201ENST00000583311 91 ntBASIC31.97■■■□□ 2.71
CNTNAP4Q9C0A0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.97■■■□□ 2.71
CNTNAP4Q9C0A0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
CNTNAP4Q9C0A0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CNTNAP4Q9C0A0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
CNTNAP4Q9C0A0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CNTNAP4Q9C0A0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CNTNAP4Q9C0A0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC31.96■■■□□ 2.71
CNTNAP4Q9C0A0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC31.96■■■□□ 2.71
CNTNAP4Q9C0A0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CNTNAP4Q9C0A0 MIR6765-201ENST00000614092 87 ntBASIC31.95■■■□□ 2.7
CNTNAP4Q9C0A0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
CNTNAP4Q9C0A0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CNTNAP4Q9C0A0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
CNTNAP4Q9C0A0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CNTNAP4Q9C0A0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
CNTNAP4Q9C0A0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.94■■■□□ 2.7
CNTNAP4Q9C0A0 AC009299.2-201ENST00000482477 511 ntBASIC31.94■■■□□ 2.7
CNTNAP4Q9C0A0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.93■■■□□ 2.7
CNTNAP4Q9C0A0 KRT8P33-201ENST00000508125 1423 ntBASIC31.93■■■□□ 2.7
CNTNAP4Q9C0A0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CNTNAP4Q9C0A0 AC103834.1-201ENST00000520383 144 ntBASIC31.93■■■□□ 2.7
CNTNAP4Q9C0A0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CNTNAP4Q9C0A0 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.92■■■□□ 2.7
CNTNAP4Q9C0A0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
CNTNAP4Q9C0A0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.91■■■□□ 2.7
CNTNAP4Q9C0A0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CNTNAP4Q9C0A0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms