Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VGLL1Q99990 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VGLL1Q99990 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
VGLL1Q99990 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.75■□□□□ 0.59
VGLL1Q99990 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VGLL1Q99990 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.74■□□□□ 0.59
VGLL1Q99990 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VGLL1Q99990 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.73■□□□□ 0.59
VGLL1Q99990 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.73■□□□□ 0.59
VGLL1Q99990 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VGLL1Q99990 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VGLL1Q99990 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VGLL1Q99990 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.73■□□□□ 0.59
VGLL1Q99990 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VGLL1Q99990 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
VGLL1Q99990 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VGLL1Q99990 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.73■□□□□ 0.59
VGLL1Q99990 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.73■□□□□ 0.59
VGLL1Q99990 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VGLL1Q99990 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
VGLL1Q99990 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.72■□□□□ 0.59
VGLL1Q99990 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VGLL1Q99990 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VGLL1Q99990 MIR3665-201ENST00000578708 105 ntBASIC18.72■□□□□ 0.59
VGLL1Q99990 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
VGLL1Q99990 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.71■□□□□ 0.59
VGLL1Q99990 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.71■□□□□ 0.59
VGLL1Q99990 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VGLL1Q99990 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
VGLL1Q99990 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VGLL1Q99990 AC145676.1-201ENST00000514988 2004 ntBASIC18.7■□□□□ 0.58
VGLL1Q99990 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.7■□□□□ 0.58
VGLL1Q99990 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.69■□□□□ 0.58
VGLL1Q99990 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.69■□□□□ 0.58
VGLL1Q99990 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VGLL1Q99990 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VGLL1Q99990 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VGLL1Q99990 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VGLL1Q99990 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VGLL1Q99990 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
VGLL1Q99990 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.68■□□□□ 0.58
VGLL1Q99990 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.68■□□□□ 0.58
VGLL1Q99990 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.68■□□□□ 0.58
VGLL1Q99990 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.68■□□□□ 0.58
VGLL1Q99990 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VGLL1Q99990 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VGLL1Q99990 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VGLL1Q99990 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VGLL1Q99990 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VGLL1Q99990 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VGLL1Q99990 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.67■□□□□ 0.58
VGLL1Q99990 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VGLL1Q99990 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VGLL1Q99990 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VGLL1Q99990 AP004609.3-201ENST00000610705 1884 ntBASIC18.67■□□□□ 0.58
VGLL1Q99990 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VGLL1Q99990 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.66■□□□□ 0.58
VGLL1Q99990 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
VGLL1Q99990 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VGLL1Q99990 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.65■□□□□ 0.58
VGLL1Q99990 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.65■□□□□ 0.58
VGLL1Q99990 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VGLL1Q99990 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VGLL1Q99990 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VGLL1Q99990 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VGLL1Q99990 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
VGLL1Q99990 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.63■□□□□ 0.57
VGLL1Q99990 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VGLL1Q99990 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.63■□□□□ 0.57
VGLL1Q99990 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VGLL1Q99990 AP006261.1-201ENST00000584783 668 ntBASIC18.63■□□□□ 0.57
VGLL1Q99990 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VGLL1Q99990 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VGLL1Q99990 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VGLL1Q99990 AC110285.7-201ENST00000624417 1536 ntBASIC18.62■□□□□ 0.57
VGLL1Q99990 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VGLL1Q99990 AC092803.2-201ENST00000564287 1899 ntBASIC18.62■□□□□ 0.57
VGLL1Q99990 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.62■□□□□ 0.57
VGLL1Q99990 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.62■□□□□ 0.57
VGLL1Q99990 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VGLL1Q99990 AC020928.2-201ENST00000588717 2197 ntBASIC18.61■□□□□ 0.57
VGLL1Q99990 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VGLL1Q99990 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VGLL1Q99990 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VGLL1Q99990 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.61■□□□□ 0.57
VGLL1Q99990 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
VGLL1Q99990 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.6■□□□□ 0.57
VGLL1Q99990 AC087741.3-201ENST00000624270 1347 ntBASIC18.6■□□□□ 0.57
VGLL1Q99990 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VGLL1Q99990 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VGLL1Q99990 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VGLL1Q99990 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.59■□□□□ 0.57
VGLL1Q99990 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VGLL1Q99990 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
VGLL1Q99990 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.59■□□□□ 0.57
VGLL1Q99990 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VGLL1Q99990 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.59■□□□□ 0.57
VGLL1Q99990 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.59■□□□□ 0.57
VGLL1Q99990 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VGLL1Q99990 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms