Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
S1PR3Q99500 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.44■□□□□ 0.86
S1PR3Q99500 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
S1PR3Q99500 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
S1PR3Q99500 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.44■□□□□ 0.86
S1PR3Q99500 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
S1PR3Q99500 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.43■□□□□ 0.86
S1PR3Q99500 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.43■□□□□ 0.86
S1PR3Q99500 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.43■□□□□ 0.86
S1PR3Q99500 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.43■□□□□ 0.86
S1PR3Q99500 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.43■□□□□ 0.86
S1PR3Q99500 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
S1PR3Q99500 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.43■□□□□ 0.86
S1PR3Q99500 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
S1PR3Q99500 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
S1PR3Q99500 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
S1PR3Q99500 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.42■□□□□ 0.86
S1PR3Q99500 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.42■□□□□ 0.86
S1PR3Q99500 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.42■□□□□ 0.86
S1PR3Q99500 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
S1PR3Q99500 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.41■□□□□ 0.86
S1PR3Q99500 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.41■□□□□ 0.86
S1PR3Q99500 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
S1PR3Q99500 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
S1PR3Q99500 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
S1PR3Q99500 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
S1PR3Q99500 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.4■□□□□ 0.86
S1PR3Q99500 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
S1PR3Q99500 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
S1PR3Q99500 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
S1PR3Q99500 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
S1PR3Q99500 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.4■□□□□ 0.86
S1PR3Q99500 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
S1PR3Q99500 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.39■□□□□ 0.86
S1PR3Q99500 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
S1PR3Q99500 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
S1PR3Q99500 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.39■□□□□ 0.85
S1PR3Q99500 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
S1PR3Q99500 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
S1PR3Q99500 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
S1PR3Q99500 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
S1PR3Q99500 DUX4L11-201ENST00000611504 1267 ntBASIC20.37■□□□□ 0.85
S1PR3Q99500 DUX4L12-201ENST00000614593 1267 ntBASIC20.37■□□□□ 0.85
S1PR3Q99500 DUX4L14-201ENST00000621227 1267 ntBASIC20.37■□□□□ 0.85
S1PR3Q99500 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.37■□□□□ 0.85
S1PR3Q99500 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
S1PR3Q99500 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
S1PR3Q99500 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
S1PR3Q99500 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.36■□□□□ 0.85
S1PR3Q99500 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.36■□□□□ 0.85
S1PR3Q99500 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
S1PR3Q99500 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.35■□□□□ 0.85
S1PR3Q99500 MIR7108-201ENST00000614319 87 ntBASIC20.35■□□□□ 0.85
S1PR3Q99500 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
S1PR3Q99500 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
S1PR3Q99500 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.34■□□□□ 0.85
S1PR3Q99500 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
S1PR3Q99500 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
S1PR3Q99500 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
S1PR3Q99500 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.33■□□□□ 0.85
S1PR3Q99500 DUX4L13-201ENST00000554103 1267 ntBASIC20.33■□□□□ 0.85
S1PR3Q99500 DUX4L15-201ENST00000611059 1267 ntBASIC20.33■□□□□ 0.85
S1PR3Q99500 DUX4L23-201ENST00000615195 1269 ntBASIC20.33■□□□□ 0.85
S1PR3Q99500 DUX4L24-201ENST00000617576 1269 ntBASIC20.33■□□□□ 0.85
S1PR3Q99500 DUX4L22-201ENST00000618238 1269 ntBASIC20.33■□□□□ 0.85
S1PR3Q99500 DUX4L20-201ENST00000619712 1269 ntBASIC20.33■□□□□ 0.85
S1PR3Q99500 DUX4L21-201ENST00000622058 1269 ntBASIC20.33■□□□□ 0.85
S1PR3Q99500 DUX4L10-201ENST00000622460 1267 ntBASIC20.33■□□□□ 0.85
S1PR3Q99500 DUX4L25-201ENST00000624915 1269 ntBASIC20.33■□□□□ 0.85
S1PR3Q99500 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
S1PR3Q99500 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
S1PR3Q99500 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.32■□□□□ 0.84
S1PR3Q99500 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
S1PR3Q99500 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
S1PR3Q99500 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
S1PR3Q99500 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
S1PR3Q99500 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
S1PR3Q99500 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
S1PR3Q99500 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
S1PR3Q99500 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
S1PR3Q99500 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
S1PR3Q99500 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
S1PR3Q99500 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.31■□□□□ 0.84
S1PR3Q99500 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.31■□□□□ 0.84
S1PR3Q99500 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
S1PR3Q99500 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.3■□□□□ 0.84
S1PR3Q99500 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.3■□□□□ 0.84
S1PR3Q99500 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
S1PR3Q99500 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
S1PR3Q99500 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
S1PR3Q99500 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
S1PR3Q99500 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.29■□□□□ 0.84
S1PR3Q99500 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.29■□□□□ 0.84
S1PR3Q99500 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.29■□□□□ 0.84
S1PR3Q99500 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.28■□□□□ 0.84
S1PR3Q99500 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
S1PR3Q99500 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
S1PR3Q99500 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
S1PR3Q99500 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
S1PR3Q99500 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms