Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.12■■■□□ 2.57
CRAMP1Q96RY5 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.12■■■□□ 2.57
CRAMP1Q96RY5 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CRAMP1Q96RY5 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
CRAMP1Q96RY5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.12■■■□□ 2.57
CRAMP1Q96RY5 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CRAMP1Q96RY5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
CRAMP1Q96RY5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CRAMP1Q96RY5 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CRAMP1Q96RY5 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.1■■■□□ 2.57
CRAMP1Q96RY5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
CRAMP1Q96RY5 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
CRAMP1Q96RY5 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
CRAMP1Q96RY5 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.09■■■□□ 2.57
CRAMP1Q96RY5 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
CRAMP1Q96RY5 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CRAMP1Q96RY5 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CRAMP1Q96RY5 RP9P-202ENST00000450133 1212 ntBASIC31.08■■■□□ 2.57
CRAMP1Q96RY5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CRAMP1Q96RY5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
CRAMP1Q96RY5 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CRAMP1Q96RY5 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.06■■■□□ 2.56
CRAMP1Q96RY5 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CRAMP1Q96RY5 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.06■■■□□ 2.56
CRAMP1Q96RY5 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.06■■■□□ 2.56
CRAMP1Q96RY5 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.06■■■□□ 2.56
CRAMP1Q96RY5 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.06■■■□□ 2.56
CRAMP1Q96RY5 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
CRAMP1Q96RY5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.05■■■□□ 2.56
CRAMP1Q96RY5 RAP2CP1-202ENST00000605179 643 ntBASIC31.05■■■□□ 2.56
CRAMP1Q96RY5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
CRAMP1Q96RY5 DUX4L9-201ENST00000449051 1259 ntBASIC31.04■■■□□ 2.56
CRAMP1Q96RY5 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
CRAMP1Q96RY5 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.04■■■□□ 2.56
CRAMP1Q96RY5 AC093536.1-201ENST00000569153 554 ntBASIC31.03■■■□□ 2.56
CRAMP1Q96RY5 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
CRAMP1Q96RY5 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CRAMP1Q96RY5 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CRAMP1Q96RY5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.02■■■□□ 2.56
CRAMP1Q96RY5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.02■■■□□ 2.56
CRAMP1Q96RY5 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.02■■■□□ 2.56
CRAMP1Q96RY5 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
CRAMP1Q96RY5 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CRAMP1Q96RY5 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CRAMP1Q96RY5 AL035685.1-201ENST00000636663 812 ntBASIC31.01■■■□□ 2.55
CRAMP1Q96RY5 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.01■■■□□ 2.55
CRAMP1Q96RY5 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CRAMP1Q96RY5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31■■■□□ 2.55
CRAMP1Q96RY5 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
CRAMP1Q96RY5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
CRAMP1Q96RY5 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.99■■■□□ 2.55
CRAMP1Q96RY5 AL451085.2-201ENST00000605085 799 ntBASIC30.99■■■□□ 2.55
CRAMP1Q96RY5 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
CRAMP1Q96RY5 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC30.99■■■□□ 2.55
CRAMP1Q96RY5 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CRAMP1Q96RY5 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CRAMP1Q96RY5 PFN2-211ENST00000489155 636 ntTSL 4 BASIC30.98■■■□□ 2.55
CRAMP1Q96RY5 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CRAMP1Q96RY5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CRAMP1Q96RY5 SPCS2P3-201ENST00000500401 656 ntBASIC30.97■■■□□ 2.55
CRAMP1Q96RY5 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
CRAMP1Q96RY5 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CRAMP1Q96RY5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CRAMP1Q96RY5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC30.96■■■□□ 2.55
CRAMP1Q96RY5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC30.95■■■□□ 2.54
CRAMP1Q96RY5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CRAMP1Q96RY5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC30.94■■■□□ 2.54
CRAMP1Q96RY5 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC30.94■■■□□ 2.54
CRAMP1Q96RY5 AC074183.2-201ENST00000623112 922 ntBASIC30.94■■■□□ 2.54
CRAMP1Q96RY5 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.94■■■□□ 2.54
CRAMP1Q96RY5 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC30.93■■■□□ 2.54
CRAMP1Q96RY5 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
CRAMP1Q96RY5 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CRAMP1Q96RY5 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
CRAMP1Q96RY5 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC30.92■■■□□ 2.54
CRAMP1Q96RY5 MIR3960-201ENST00000583311 91 ntBASIC30.92■■■□□ 2.54
CRAMP1Q96RY5 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CRAMP1Q96RY5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CRAMP1Q96RY5 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CRAMP1Q96RY5 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC30.91■■■□□ 2.54
CRAMP1Q96RY5 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
CRAMP1Q96RY5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CRAMP1Q96RY5 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CRAMP1Q96RY5 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CRAMP1Q96RY5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
CRAMP1Q96RY5 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC30.9■■■□□ 2.54
CRAMP1Q96RY5 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC30.9■■■□□ 2.54
CRAMP1Q96RY5 AC010980.1-201ENST00000587192 1142 ntBASIC30.89■■■□□ 2.54
CRAMP1Q96RY5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC30.89■■■□□ 2.54
CRAMP1Q96RY5 BHLHE23-202ENST00000612929 1109 ntBASIC30.89■■■□□ 2.54
CRAMP1Q96RY5 AP002414.2-202ENST00000590929 1450 ntBASIC30.89■■■□□ 2.53
CRAMP1Q96RY5 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CRAMP1Q96RY5 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
CRAMP1Q96RY5 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
CRAMP1Q96RY5 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
CRAMP1Q96RY5 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.88■■■□□ 2.53
CRAMP1Q96RY5 AL139393.2-201ENST00000608721 2025 ntBASIC30.87■■■□□ 2.53
CRAMP1Q96RY5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC30.87■■■□□ 2.53
CRAMP1Q96RY5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC30.87■■■□□ 2.53
CRAMP1Q96RY5 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms