Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DUX3Q96PT4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
DUX3Q96PT4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DUX3Q96PT4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.34■□□□□ 0.69
DUX3Q96PT4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DUX3Q96PT4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DUX3Q96PT4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.33■□□□□ 0.68
DUX3Q96PT4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
DUX3Q96PT4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
DUX3Q96PT4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.33■□□□□ 0.68
DUX3Q96PT4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.32■□□□□ 0.68
DUX3Q96PT4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
DUX3Q96PT4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
DUX3Q96PT4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
DUX3Q96PT4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DUX3Q96PT4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DUX3Q96PT4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
DUX3Q96PT4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DUX3Q96PT4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DUX3Q96PT4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
DUX3Q96PT4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DUX3Q96PT4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DUX3Q96PT4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DUX3Q96PT4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DUX3Q96PT4 AC126177.7-201ENST00000547904 679 ntBASIC19.3■□□□□ 0.68
DUX3Q96PT4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
DUX3Q96PT4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DUX3Q96PT4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
DUX3Q96PT4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DUX3Q96PT4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DUX3Q96PT4 AP002414.2-202ENST00000590929 1450 ntBASIC19.29■□□□□ 0.68
DUX3Q96PT4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DUX3Q96PT4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DUX3Q96PT4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DUX3Q96PT4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.28■□□□□ 0.68
DUX3Q96PT4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.28■□□□□ 0.68
DUX3Q96PT4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DUX3Q96PT4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.28■□□□□ 0.68
DUX3Q96PT4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DUX3Q96PT4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DUX3Q96PT4 AL359258.2-201ENST00000564063 1566 ntBASIC19.27■□□□□ 0.68
DUX3Q96PT4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DUX3Q96PT4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
DUX3Q96PT4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DUX3Q96PT4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.27■□□□□ 0.68
DUX3Q96PT4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DUX3Q96PT4 AC092296.2-201ENST00000589470 999 ntBASIC19.27■□□□□ 0.68
DUX3Q96PT4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
DUX3Q96PT4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DUX3Q96PT4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DUX3Q96PT4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.26■□□□□ 0.67
DUX3Q96PT4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DUX3Q96PT4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
DUX3Q96PT4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.25■□□□□ 0.67
DUX3Q96PT4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
DUX3Q96PT4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DUX3Q96PT4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DUX3Q96PT4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
DUX3Q96PT4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DUX3Q96PT4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.25■□□□□ 0.67
DUX3Q96PT4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.24■□□□□ 0.67
DUX3Q96PT4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DUX3Q96PT4 AL157400.5-201ENST00000507624 621 ntBASIC19.24■□□□□ 0.67
DUX3Q96PT4 NTF6A-201ENST00000591175 560 ntBASIC19.24■□□□□ 0.67
DUX3Q96PT4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DUX3Q96PT4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DUX3Q96PT4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.23■□□□□ 0.67
DUX3Q96PT4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.23■□□□□ 0.67
DUX3Q96PT4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.23■□□□□ 0.67
DUX3Q96PT4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DUX3Q96PT4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.23■□□□□ 0.67
DUX3Q96PT4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.22■□□□□ 0.67
DUX3Q96PT4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
DUX3Q96PT4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DUX3Q96PT4 U85056.1-201ENST00000616429 682 ntBASIC19.22■□□□□ 0.67
DUX3Q96PT4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DUX3Q96PT4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
DUX3Q96PT4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DUX3Q96PT4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.21■□□□□ 0.67
DUX3Q96PT4 ECEL1P2-201ENST00000461596 1295 ntBASIC19.21■□□□□ 0.67
DUX3Q96PT4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.21■□□□□ 0.67
DUX3Q96PT4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
DUX3Q96PT4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.21■□□□□ 0.67
DUX3Q96PT4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DUX3Q96PT4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DUX3Q96PT4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DUX3Q96PT4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
DUX3Q96PT4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
DUX3Q96PT4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DUX3Q96PT4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
DUX3Q96PT4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
DUX3Q96PT4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.19■□□□□ 0.66
DUX3Q96PT4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DUX3Q96PT4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
DUX3Q96PT4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DUX3Q96PT4 DRD5P2-201ENST00000421395 2012 ntBASIC19.18■□□□□ 0.66
DUX3Q96PT4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DUX3Q96PT4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.17■□□□□ 0.66
DUX3Q96PT4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DUX3Q96PT4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms