Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.45■■□□□ 1.34
COL21A1Q96P44 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL21A1Q96P44 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL21A1Q96P44 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.45■■□□□ 1.34
COL21A1Q96P44 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL21A1Q96P44 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL21A1Q96P44 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL21A1Q96P44 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL21A1Q96P44 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL21A1Q96P44 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.44■■□□□ 1.34
COL21A1Q96P44 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
COL21A1Q96P44 AC110285.7-201ENST00000624417 1536 ntBASIC23.43■■□□□ 1.34
COL21A1Q96P44 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.43■■□□□ 1.34
COL21A1Q96P44 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
COL21A1Q96P44 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
COL21A1Q96P44 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
COL21A1Q96P44 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL21A1Q96P44 AC018358.1-201ENST00000631079 1402 ntBASIC23.42■■□□□ 1.34
COL21A1Q96P44 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.42■■□□□ 1.34
COL21A1Q96P44 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL21A1Q96P44 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
COL21A1Q96P44 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL21A1Q96P44 CR559946.2-201ENST00000623684 991 ntBASIC23.42■■□□□ 1.34
COL21A1Q96P44 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
COL21A1Q96P44 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
COL21A1Q96P44 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL21A1Q96P44 MIR3648-2-201ENST00000581792 180 ntBASIC23.41■■□□□ 1.34
COL21A1Q96P44 MIR3648-1-201ENST00000615959 180 ntBASIC23.41■■□□□ 1.34
COL21A1Q96P44 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.41■■□□□ 1.34
COL21A1Q96P44 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL21A1Q96P44 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL21A1Q96P44 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL21A1Q96P44 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
COL21A1Q96P44 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL21A1Q96P44 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.4■■□□□ 1.34
COL21A1Q96P44 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.4■■□□□ 1.34
COL21A1Q96P44 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.4■■□□□ 1.34
COL21A1Q96P44 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL21A1Q96P44 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
COL21A1Q96P44 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL21A1Q96P44 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
COL21A1Q96P44 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.39■■□□□ 1.34
COL21A1Q96P44 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.39■■□□□ 1.34
COL21A1Q96P44 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.39■■□□□ 1.33
COL21A1Q96P44 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.39■■□□□ 1.33
COL21A1Q96P44 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.39■■□□□ 1.33
COL21A1Q96P44 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL21A1Q96P44 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL21A1Q96P44 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL21A1Q96P44 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
COL21A1Q96P44 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.37■■□□□ 1.33
COL21A1Q96P44 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.37■■□□□ 1.33
COL21A1Q96P44 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
COL21A1Q96P44 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
COL21A1Q96P44 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL21A1Q96P44 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
COL21A1Q96P44 AC016575.1-201ENST00000607026 382 ntBASIC23.36■■□□□ 1.33
COL21A1Q96P44 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
COL21A1Q96P44 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL21A1Q96P44 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL21A1Q96P44 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL21A1Q96P44 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
COL21A1Q96P44 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL21A1Q96P44 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL21A1Q96P44 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
COL21A1Q96P44 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL21A1Q96P44 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.34■■□□□ 1.33
COL21A1Q96P44 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.34■■□□□ 1.33
COL21A1Q96P44 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.34■■□□□ 1.33
COL21A1Q96P44 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.34■■□□□ 1.33
COL21A1Q96P44 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
COL21A1Q96P44 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL21A1Q96P44 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
COL21A1Q96P44 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
COL21A1Q96P44 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL21A1Q96P44 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
COL21A1Q96P44 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
COL21A1Q96P44 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
COL21A1Q96P44 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL21A1Q96P44 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL21A1Q96P44 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL21A1Q96P44 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COL21A1Q96P44 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COL21A1Q96P44 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL21A1Q96P44 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
COL21A1Q96P44 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL21A1Q96P44 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL21A1Q96P44 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.29■■□□□ 1.32
COL21A1Q96P44 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL21A1Q96P44 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL21A1Q96P44 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.28■■□□□ 1.32
COL21A1Q96P44 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL21A1Q96P44 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.27■■□□□ 1.32
COL21A1Q96P44 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL21A1Q96P44 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
COL21A1Q96P44 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.27■■□□□ 1.32
COL21A1Q96P44 AC008813.1-201ENST00000536597 885 ntBASIC23.27■■□□□ 1.32
COL21A1Q96P44 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL21A1Q96P44 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.27■■□□□ 1.32
COL21A1Q96P44 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms