Protein–RNA interactions for Protein: Q8TCU5

GRIN3A, Glutamate receptor ionotropic, NMDA 3A, humanhuman

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3AQ8TCU5 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
GRIN3AQ8TCU5 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
GRIN3AQ8TCU5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
GRIN3AQ8TCU5 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
GRIN3AQ8TCU5 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
GRIN3AQ8TCU5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
GRIN3AQ8TCU5 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
GRIN3AQ8TCU5 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
GRIN3AQ8TCU5 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
GRIN3AQ8TCU5 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
GRIN3AQ8TCU5 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
GRIN3AQ8TCU5 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
GRIN3AQ8TCU5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
GRIN3AQ8TCU5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
GRIN3AQ8TCU5 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.39■■□□□ 1.66
GRIN3AQ8TCU5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.39■■□□□ 1.65
GRIN3AQ8TCU5 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
GRIN3AQ8TCU5 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
GRIN3AQ8TCU5 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.38■■□□□ 1.65
GRIN3AQ8TCU5 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
GRIN3AQ8TCU5 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
GRIN3AQ8TCU5 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.36■■□□□ 1.65
GRIN3AQ8TCU5 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
GRIN3AQ8TCU5 RARRES2P2-201ENST00000394842 485 ntBASIC25.36■■□□□ 1.65
GRIN3AQ8TCU5 AC060814.1-201ENST00000554326 538 ntBASIC25.36■■□□□ 1.65
GRIN3AQ8TCU5 AC142086.6-201ENST00000621154 1765 ntBASIC25.36■■□□□ 1.65
GRIN3AQ8TCU5 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
GRIN3AQ8TCU5 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
GRIN3AQ8TCU5 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.35■■□□□ 1.65
GRIN3AQ8TCU5 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
GRIN3AQ8TCU5 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
GRIN3AQ8TCU5 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
GRIN3AQ8TCU5 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
GRIN3AQ8TCU5 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
GRIN3AQ8TCU5 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.34■■□□□ 1.65
GRIN3AQ8TCU5 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.34■■□□□ 1.65
GRIN3AQ8TCU5 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
GRIN3AQ8TCU5 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.34■■□□□ 1.65
GRIN3AQ8TCU5 RNF126P1-201ENST00000567452 1320 ntBASIC25.34■■□□□ 1.65
GRIN3AQ8TCU5 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
GRIN3AQ8TCU5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
GRIN3AQ8TCU5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.33■■□□□ 1.65
GRIN3AQ8TCU5 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.64
GRIN3AQ8TCU5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
GRIN3AQ8TCU5 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
GRIN3AQ8TCU5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
GRIN3AQ8TCU5 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
GRIN3AQ8TCU5 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
GRIN3AQ8TCU5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
GRIN3AQ8TCU5 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
GRIN3AQ8TCU5 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
GRIN3AQ8TCU5 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
GRIN3AQ8TCU5 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
GRIN3AQ8TCU5 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.31■■□□□ 1.64
GRIN3AQ8TCU5 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
GRIN3AQ8TCU5 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.3■■□□□ 1.64
GRIN3AQ8TCU5 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.3■■□□□ 1.64
GRIN3AQ8TCU5 AC126177.7-201ENST00000547904 679 ntBASIC25.3■■□□□ 1.64
GRIN3AQ8TCU5 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
GRIN3AQ8TCU5 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.29■■□□□ 1.64
GRIN3AQ8TCU5 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
GRIN3AQ8TCU5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.28■■□□□ 1.64
GRIN3AQ8TCU5 AC018358.1-201ENST00000631079 1402 ntBASIC25.28■■□□□ 1.64
GRIN3AQ8TCU5 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.28■■□□□ 1.64
GRIN3AQ8TCU5 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
GRIN3AQ8TCU5 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
GRIN3AQ8TCU5 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.27■■□□□ 1.64
GRIN3AQ8TCU5 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.27■■□□□ 1.64
GRIN3AQ8TCU5 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
GRIN3AQ8TCU5 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
GRIN3AQ8TCU5 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.26■■□□□ 1.63
GRIN3AQ8TCU5 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.26■■□□□ 1.63
GRIN3AQ8TCU5 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
GRIN3AQ8TCU5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
GRIN3AQ8TCU5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
GRIN3AQ8TCU5 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.26■■□□□ 1.63
GRIN3AQ8TCU5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
GRIN3AQ8TCU5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
GRIN3AQ8TCU5 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
GRIN3AQ8TCU5 AL359258.2-201ENST00000564063 1566 ntBASIC25.24■■□□□ 1.63
GRIN3AQ8TCU5 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
GRIN3AQ8TCU5 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
GRIN3AQ8TCU5 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
GRIN3AQ8TCU5 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
GRIN3AQ8TCU5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.23■■□□□ 1.63
GRIN3AQ8TCU5 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.22■■□□□ 1.63
GRIN3AQ8TCU5 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
GRIN3AQ8TCU5 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
GRIN3AQ8TCU5 AC092296.2-201ENST00000589470 999 ntBASIC25.22■■□□□ 1.63
GRIN3AQ8TCU5 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
GRIN3AQ8TCU5 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
GRIN3AQ8TCU5 ABHD17AP5-201ENST00000580133 923 ntBASIC25.21■■□□□ 1.63
GRIN3AQ8TCU5 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
GRIN3AQ8TCU5 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
GRIN3AQ8TCU5 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
GRIN3AQ8TCU5 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
GRIN3AQ8TCU5 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.19■■□□□ 1.62
GRIN3AQ8TCU5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
GRIN3AQ8TCU5 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
GRIN3AQ8TCU5 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms