Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.81■■□□□ 1.08
LINC01560Q8TB33 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
LINC01560Q8TB33 ABCB10P3-201ENST00000561950 2166 ntBASIC21.81■■□□□ 1.08
LINC01560Q8TB33 AL139393.2-201ENST00000608721 2025 ntBASIC21.8■■□□□ 1.08
LINC01560Q8TB33 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
LINC01560Q8TB33 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
LINC01560Q8TB33 RARRES2P1-201ENST00000474487 481 ntBASIC21.8■■□□□ 1.08
LINC01560Q8TB33 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.8■■□□□ 1.08
LINC01560Q8TB33 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINC01560Q8TB33 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
LINC01560Q8TB33 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINC01560Q8TB33 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LINC01560Q8TB33 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINC01560Q8TB33 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINC01560Q8TB33 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.79■■□□□ 1.08
LINC01560Q8TB33 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
LINC01560Q8TB33 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LINC01560Q8TB33 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
LINC01560Q8TB33 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.78■■□□□ 1.08
LINC01560Q8TB33 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC01560Q8TB33 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.77■■□□□ 1.08
LINC01560Q8TB33 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.77■■□□□ 1.08
LINC01560Q8TB33 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.76■■□□□ 1.07
LINC01560Q8TB33 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LINC01560Q8TB33 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LINC01560Q8TB33 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
LINC01560Q8TB33 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.75■■□□□ 1.07
LINC01560Q8TB33 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.75■■□□□ 1.07
LINC01560Q8TB33 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
LINC01560Q8TB33 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.74■■□□□ 1.07
LINC01560Q8TB33 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.74■■□□□ 1.07
LINC01560Q8TB33 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.74■■□□□ 1.07
LINC01560Q8TB33 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINC01560Q8TB33 AC026202.3-201ENST00000600805 1127 ntBASIC21.74■■□□□ 1.07
LINC01560Q8TB33 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINC01560Q8TB33 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINC01560Q8TB33 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LINC01560Q8TB33 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LINC01560Q8TB33 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
LINC01560Q8TB33 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
LINC01560Q8TB33 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.73■■□□□ 1.07
LINC01560Q8TB33 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LINC01560Q8TB33 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
LINC01560Q8TB33 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINC01560Q8TB33 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINC01560Q8TB33 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINC01560Q8TB33 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.72■■□□□ 1.07
LINC01560Q8TB33 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINC01560Q8TB33 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LINC01560Q8TB33 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LINC01560Q8TB33 AC025884.2-201ENST00000553429 711 ntBASIC21.71■■□□□ 1.07
LINC01560Q8TB33 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
LINC01560Q8TB33 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINC01560Q8TB33 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LINC01560Q8TB33 RP9P-202ENST00000450133 1212 ntBASIC21.7■■□□□ 1.06
LINC01560Q8TB33 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.7■■□□□ 1.06
LINC01560Q8TB33 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINC01560Q8TB33 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LINC01560Q8TB33 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINC01560Q8TB33 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
LINC01560Q8TB33 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
LINC01560Q8TB33 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINC01560Q8TB33 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.69■■□□□ 1.06
LINC01560Q8TB33 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINC01560Q8TB33 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.68■■□□□ 1.06
LINC01560Q8TB33 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.68■■□□□ 1.06
LINC01560Q8TB33 AC093536.1-201ENST00000569153 554 ntBASIC21.68■■□□□ 1.06
LINC01560Q8TB33 AP002414.2-202ENST00000590929 1450 ntBASIC21.68■■□□□ 1.06
LINC01560Q8TB33 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC01560Q8TB33 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.67■■□□□ 1.06
LINC01560Q8TB33 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
LINC01560Q8TB33 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC01560Q8TB33 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC01560Q8TB33 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC01560Q8TB33 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.67■■□□□ 1.06
LINC01560Q8TB33 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.67■■□□□ 1.06
LINC01560Q8TB33 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
LINC01560Q8TB33 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
LINC01560Q8TB33 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LINC01560Q8TB33 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
LINC01560Q8TB33 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.65■■□□□ 1.06
LINC01560Q8TB33 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LINC01560Q8TB33 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
LINC01560Q8TB33 DUX4L9-201ENST00000449051 1259 ntBASIC21.64■■□□□ 1.05
LINC01560Q8TB33 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
LINC01560Q8TB33 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINC01560Q8TB33 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC01560Q8TB33 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.63■■□□□ 1.05
LINC01560Q8TB33 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LINC01560Q8TB33 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC01560Q8TB33 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.63■■□□□ 1.05
LINC01560Q8TB33 BHLHE23-202ENST00000612929 1109 ntBASIC21.63■■□□□ 1.05
LINC01560Q8TB33 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
LINC01560Q8TB33 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.63■■□□□ 1.05
LINC01560Q8TB33 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC01560Q8TB33 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC01560Q8TB33 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
LINC01560Q8TB33 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC01560Q8TB33 ABCB10P1-201ENST00000614297 2181 ntBASIC21.63■■□□□ 1.05
LINC01560Q8TB33 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms