Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.11■■■□□ 2.57
RTL9Q8NET4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.11■■■□□ 2.57
RTL9Q8NET4 AL359258.2-201ENST00000564063 1566 ntBASIC31.11■■■□□ 2.57
RTL9Q8NET4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
RTL9Q8NET4 KRT18P60-201ENST00000312876 1297 ntBASIC31.1■■■□□ 2.57
RTL9Q8NET4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.1■■■□□ 2.57
RTL9Q8NET4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
RTL9Q8NET4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
RTL9Q8NET4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.1■■■□□ 2.57
RTL9Q8NET4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.1■■■□□ 2.57
RTL9Q8NET4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
RTL9Q8NET4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
RTL9Q8NET4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
RTL9Q8NET4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
RTL9Q8NET4 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.07■■■□□ 2.56
RTL9Q8NET4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.06■■■□□ 2.56
RTL9Q8NET4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.06■■■□□ 2.56
RTL9Q8NET4 AC025884.2-201ENST00000553429 711 ntBASIC31.06■■■□□ 2.56
RTL9Q8NET4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
RTL9Q8NET4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
RTL9Q8NET4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
RTL9Q8NET4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RTL9Q8NET4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.05■■■□□ 2.56
RTL9Q8NET4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
RTL9Q8NET4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
RTL9Q8NET4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.05■■■□□ 2.56
RTL9Q8NET4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RTL9Q8NET4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
RTL9Q8NET4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RTL9Q8NET4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.03■■■□□ 2.56
RTL9Q8NET4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.03■■■□□ 2.56
RTL9Q8NET4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
RTL9Q8NET4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC31.02■■■□□ 2.56
RTL9Q8NET4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
RTL9Q8NET4 AC004987.1-201ENST00000428627 508 ntBASIC31.02■■■□□ 2.56
RTL9Q8NET4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.02■■■□□ 2.56
RTL9Q8NET4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC31.01■■■□□ 2.55
RTL9Q8NET4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
RTL9Q8NET4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
RTL9Q8NET4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
RTL9Q8NET4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
RTL9Q8NET4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
RTL9Q8NET4 TSPY13P-201ENST00000338964 914 ntBASIC31■■■□□ 2.55
RTL9Q8NET4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
RTL9Q8NET4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RTL9Q8NET4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
RTL9Q8NET4 SMPD5-203ENST00000639008 1464 ntBASIC30.99■■■□□ 2.55
RTL9Q8NET4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
RTL9Q8NET4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
RTL9Q8NET4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
RTL9Q8NET4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
RTL9Q8NET4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
RTL9Q8NET4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC30.98■■■□□ 2.55
RTL9Q8NET4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC30.98■■■□□ 2.55
RTL9Q8NET4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
RTL9Q8NET4 ATP5G2P3-201ENST00000429083 425 ntBASIC30.97■■■□□ 2.55
RTL9Q8NET4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
RTL9Q8NET4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
RTL9Q8NET4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
RTL9Q8NET4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
RTL9Q8NET4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC30.96■■■□□ 2.55
RTL9Q8NET4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
RTL9Q8NET4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
RTL9Q8NET4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
RTL9Q8NET4 AC009831.1-201ENST00000580420 1582 ntBASIC30.96■■■□□ 2.55
RTL9Q8NET4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC30.96■■■□□ 2.55
RTL9Q8NET4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.95■■■□□ 2.54
RTL9Q8NET4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.93■■■□□ 2.54
RTL9Q8NET4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
RTL9Q8NET4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
RTL9Q8NET4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC30.92■■■□□ 2.54
RTL9Q8NET4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
RTL9Q8NET4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.91■■■□□ 2.54
RTL9Q8NET4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
RTL9Q8NET4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC30.91■■■□□ 2.54
RTL9Q8NET4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
RTL9Q8NET4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
RTL9Q8NET4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
RTL9Q8NET4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
RTL9Q8NET4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC30.9■■■□□ 2.54
RTL9Q8NET4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC30.89■■■□□ 2.54
RTL9Q8NET4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC30.89■■■□□ 2.54
RTL9Q8NET4 AC026202.3-201ENST00000600805 1127 ntBASIC30.89■■■□□ 2.54
RTL9Q8NET4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
RTL9Q8NET4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
RTL9Q8NET4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
RTL9Q8NET4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
RTL9Q8NET4 RARRES2P1-201ENST00000474487 481 ntBASIC30.88■■■□□ 2.53
RTL9Q8NET4 AL592293.1-201ENST00000502889 1188 ntBASIC30.88■■■□□ 2.53
RTL9Q8NET4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
RTL9Q8NET4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
RTL9Q8NET4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
RTL9Q8NET4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC30.87■■■□□ 2.53
RTL9Q8NET4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC30.87■■■□□ 2.53
RTL9Q8NET4 AC129492.7-201ENST00000622992 756 ntBASIC30.87■■■□□ 2.53
RTL9Q8NET4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
RTL9Q8NET4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.86■■■□□ 2.53
RTL9Q8NET4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
RTL9Q8NET4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
RTL9Q8NET4 RP9P-202ENST00000450133 1212 ntBASIC30.86■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms