Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SMC5Q8IY18 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SMC5Q8IY18 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.05■■■□□ 2.56
SMC5Q8IY18 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
SMC5Q8IY18 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.05■■■□□ 2.56
SMC5Q8IY18 SHF-207ENST00000560540 2062 ntTSL 5 BASIC31.04■■■□□ 2.56
SMC5Q8IY18 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.04■■■□□ 2.56
SMC5Q8IY18 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.04■■■□□ 2.56
SMC5Q8IY18 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.04■■■□□ 2.56
SMC5Q8IY18 LINC01971-201ENST00000617888 1048 ntBASIC31.04■■■□□ 2.56
SMC5Q8IY18 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
SMC5Q8IY18 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
SMC5Q8IY18 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SMC5Q8IY18 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC31.02■■■□□ 2.56
SMC5Q8IY18 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.02■■■□□ 2.56
SMC5Q8IY18 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC31.02■■■□□ 2.56
SMC5Q8IY18 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.56
SMC5Q8IY18 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.01■■■□□ 2.55
SMC5Q8IY18 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC31.01■■■□□ 2.55
SMC5Q8IY18 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31■■■□□ 2.55
SMC5Q8IY18 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31■■■□□ 2.55
SMC5Q8IY18 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SMC5Q8IY18 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC31■■■□□ 2.55
SMC5Q8IY18 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SMC5Q8IY18 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
SMC5Q8IY18 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SMC5Q8IY18 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SMC5Q8IY18 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.98■■■□□ 2.55
SMC5Q8IY18 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SMC5Q8IY18 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.97■■■□□ 2.55
SMC5Q8IY18 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
SMC5Q8IY18 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
SMC5Q8IY18 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC30.96■■■□□ 2.55
SMC5Q8IY18 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SMC5Q8IY18 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.96■■■□□ 2.55
SMC5Q8IY18 DUX4L13-201ENST00000554103 1267 ntBASIC30.95■■■□□ 2.55
SMC5Q8IY18 DUX4L15-201ENST00000611059 1267 ntBASIC30.95■■■□□ 2.55
SMC5Q8IY18 DUX4L23-201ENST00000615195 1269 ntBASIC30.95■■■□□ 2.55
SMC5Q8IY18 DUX4L24-201ENST00000617576 1269 ntBASIC30.95■■■□□ 2.55
SMC5Q8IY18 DUX4L22-201ENST00000618238 1269 ntBASIC30.95■■■□□ 2.55
SMC5Q8IY18 DUX4L20-201ENST00000619712 1269 ntBASIC30.95■■■□□ 2.55
SMC5Q8IY18 DUX4L21-201ENST00000622058 1269 ntBASIC30.95■■■□□ 2.55
SMC5Q8IY18 DUX4L10-201ENST00000622460 1267 ntBASIC30.95■■■□□ 2.55
SMC5Q8IY18 DUX4L25-201ENST00000624915 1269 ntBASIC30.95■■■□□ 2.55
SMC5Q8IY18 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC30.95■■■□□ 2.54
SMC5Q8IY18 AC091060.1-201ENST00000623524 1766 ntBASIC30.94■■■□□ 2.54
SMC5Q8IY18 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC30.94■■■□□ 2.54
SMC5Q8IY18 WHAMMP3-201ENST00000611636 1609 ntBASIC30.94■■■□□ 2.54
SMC5Q8IY18 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.94■■■□□ 2.54
SMC5Q8IY18 AP004609.3-201ENST00000610705 1884 ntBASIC30.93■■■□□ 2.54
SMC5Q8IY18 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SMC5Q8IY18 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SMC5Q8IY18 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SMC5Q8IY18 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SMC5Q8IY18 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
SMC5Q8IY18 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
SMC5Q8IY18 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC30.9■■■□□ 2.54
SMC5Q8IY18 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC30.9■■■□□ 2.54
SMC5Q8IY18 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC30.89■■■□□ 2.54
SMC5Q8IY18 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
SMC5Q8IY18 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC30.89■■■□□ 2.54
SMC5Q8IY18 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.89■■■□□ 2.53
SMC5Q8IY18 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
SMC5Q8IY18 DUX4L11-201ENST00000611504 1267 ntBASIC30.88■■■□□ 2.53
SMC5Q8IY18 DUX4L12-201ENST00000614593 1267 ntBASIC30.88■■■□□ 2.53
SMC5Q8IY18 DUX4L14-201ENST00000621227 1267 ntBASIC30.88■■■□□ 2.53
SMC5Q8IY18 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC30.88■■■□□ 2.53
SMC5Q8IY18 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
SMC5Q8IY18 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SMC5Q8IY18 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SMC5Q8IY18 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
SMC5Q8IY18 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SMC5Q8IY18 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.86■■■□□ 2.53
SMC5Q8IY18 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
SMC5Q8IY18 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.86■■■□□ 2.53
SMC5Q8IY18 AC142472.1-201ENST00000612013 1741 ntBASIC30.86■■■□□ 2.53
SMC5Q8IY18 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.86■■■□□ 2.53
SMC5Q8IY18 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC30.86■■■□□ 2.53
SMC5Q8IY18 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SMC5Q8IY18 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
SMC5Q8IY18 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.85■■■□□ 2.53
SMC5Q8IY18 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
SMC5Q8IY18 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
SMC5Q8IY18 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.83■■■□□ 2.53
SMC5Q8IY18 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SMC5Q8IY18 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SMC5Q8IY18 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SMC5Q8IY18 ZNRF2P2-203ENST00000454624 420 ntBASIC30.82■■■□□ 2.52
SMC5Q8IY18 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
SMC5Q8IY18 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
SMC5Q8IY18 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
SMC5Q8IY18 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
SMC5Q8IY18 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SMC5Q8IY18 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SMC5Q8IY18 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SMC5Q8IY18 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
SMC5Q8IY18 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SMC5Q8IY18 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.79■■■□□ 2.52
SMC5Q8IY18 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SMC5Q8IY18 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms