Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.92■■■□□ 2.54
CHD1LQ86WJ1 AL449106.1-201ENST00000608517 1980 ntBASIC30.92■■■□□ 2.54
CHD1LQ86WJ1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
CHD1LQ86WJ1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.9■■■□□ 2.54
CHD1LQ86WJ1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
CHD1LQ86WJ1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
CHD1LQ86WJ1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
CHD1LQ86WJ1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.89■■■□□ 2.54
CHD1LQ86WJ1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CHD1LQ86WJ1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
CHD1LQ86WJ1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.89■■■□□ 2.54
CHD1LQ86WJ1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CHD1LQ86WJ1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CHD1LQ86WJ1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CHD1LQ86WJ1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CHD1LQ86WJ1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.86■■■□□ 2.53
CHD1LQ86WJ1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC30.86■■■□□ 2.53
CHD1LQ86WJ1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CHD1LQ86WJ1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CHD1LQ86WJ1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC30.85■■■□□ 2.53
CHD1LQ86WJ1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CHD1LQ86WJ1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CHD1LQ86WJ1 DUX4L13-201ENST00000554103 1267 ntBASIC30.84■■■□□ 2.53
CHD1LQ86WJ1 DUX4L15-201ENST00000611059 1267 ntBASIC30.84■■■□□ 2.53
CHD1LQ86WJ1 DUX4L23-201ENST00000615195 1269 ntBASIC30.84■■■□□ 2.53
CHD1LQ86WJ1 DUX4L24-201ENST00000617576 1269 ntBASIC30.84■■■□□ 2.53
CHD1LQ86WJ1 DUX4L22-201ENST00000618238 1269 ntBASIC30.84■■■□□ 2.53
CHD1LQ86WJ1 DUX4L20-201ENST00000619712 1269 ntBASIC30.84■■■□□ 2.53
CHD1LQ86WJ1 DUX4L21-201ENST00000622058 1269 ntBASIC30.84■■■□□ 2.53
CHD1LQ86WJ1 DUX4L10-201ENST00000622460 1267 ntBASIC30.84■■■□□ 2.53
CHD1LQ86WJ1 DUX4L25-201ENST00000624915 1269 ntBASIC30.84■■■□□ 2.53
CHD1LQ86WJ1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CHD1LQ86WJ1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
CHD1LQ86WJ1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CHD1LQ86WJ1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CHD1LQ86WJ1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.81■■■□□ 2.52
CHD1LQ86WJ1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
CHD1LQ86WJ1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC30.8■■■□□ 2.52
CHD1LQ86WJ1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC30.8■■■□□ 2.52
CHD1LQ86WJ1 DUX4L11-201ENST00000611504 1267 ntBASIC30.8■■■□□ 2.52
CHD1LQ86WJ1 DUX4L12-201ENST00000614593 1267 ntBASIC30.8■■■□□ 2.52
CHD1LQ86WJ1 DUX4L14-201ENST00000621227 1267 ntBASIC30.8■■■□□ 2.52
CHD1LQ86WJ1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CHD1LQ86WJ1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
CHD1LQ86WJ1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC30.79■■■□□ 2.52
CHD1LQ86WJ1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CHD1LQ86WJ1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CHD1LQ86WJ1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CHD1LQ86WJ1 AP004609.3-201ENST00000610705 1884 ntBASIC30.78■■■□□ 2.52
CHD1LQ86WJ1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
CHD1LQ86WJ1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CHD1LQ86WJ1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
CHD1LQ86WJ1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CHD1LQ86WJ1 WHAMMP3-201ENST00000611636 1609 ntBASIC30.78■■■□□ 2.52
CHD1LQ86WJ1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
CHD1LQ86WJ1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC30.78■■■□□ 2.52
CHD1LQ86WJ1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CHD1LQ86WJ1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
CHD1LQ86WJ1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
CHD1LQ86WJ1 ZNRF2P2-203ENST00000454624 420 ntBASIC30.77■■■□□ 2.52
CHD1LQ86WJ1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.77■■■□□ 2.52
CHD1LQ86WJ1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CHD1LQ86WJ1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC30.76■■■□□ 2.51
CHD1LQ86WJ1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC30.75■■■□□ 2.51
CHD1LQ86WJ1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.75■■■□□ 2.51
CHD1LQ86WJ1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CHD1LQ86WJ1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC30.74■■■□□ 2.51
CHD1LQ86WJ1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.74■■■□□ 2.51
CHD1LQ86WJ1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.73■■■□□ 2.51
CHD1LQ86WJ1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.73■■■□□ 2.51
CHD1LQ86WJ1 AC091060.1-201ENST00000623524 1766 ntBASIC30.73■■■□□ 2.51
CHD1LQ86WJ1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CHD1LQ86WJ1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CHD1LQ86WJ1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC30.71■■■□□ 2.51
CHD1LQ86WJ1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CHD1LQ86WJ1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
CHD1LQ86WJ1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CHD1LQ86WJ1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CHD1LQ86WJ1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.7■■■□□ 2.5
CHD1LQ86WJ1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CHD1LQ86WJ1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.69■■■□□ 2.5
CHD1LQ86WJ1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC30.69■■■□□ 2.5
CHD1LQ86WJ1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CHD1LQ86WJ1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
CHD1LQ86WJ1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC30.68■■■□□ 2.5
CHD1LQ86WJ1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CHD1LQ86WJ1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.68■■■□□ 2.5
CHD1LQ86WJ1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
CHD1LQ86WJ1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
CHD1LQ86WJ1 AC142472.1-201ENST00000612013 1741 ntBASIC30.67■■■□□ 2.5
CHD1LQ86WJ1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CHD1LQ86WJ1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CHD1LQ86WJ1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.66■■■□□ 2.5
CHD1LQ86WJ1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
CHD1LQ86WJ1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CHD1LQ86WJ1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
CHD1LQ86WJ1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CHD1LQ86WJ1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
CHD1LQ86WJ1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC30.64■■■□□ 2.5
CHD1LQ86WJ1 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.64■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms