Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 EIF2B5-212ENST00000491144 3038 ntTSL 226.53■■□□□ 1.841e-6■■■■□ 24.5
PABPN1Q86U42 EGFL8-222ENST00000466239 2441 ntTSL 225.65■■□□□ 1.71e-6■■■■□ 24.5
PABPN1Q86U42 PPT2-EGFL8-203ENST00000428388 2878 ntAPPRIS P5 TSL 225.54■■□□□ 1.681e-6■■■■□ 24.5
PABPN1Q86U42 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC25.49■■□□□ 1.671e-6■■■■□ 24.5
PABPN1Q86U42 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC25.22■■□□□ 1.631e-6■■■■□ 24.5
PABPN1Q86U42 ZSWIM8-217ENST00000603409 842 ntTSL 524.1■■□□□ 1.451e-6■■■■□ 24.5
PABPN1Q86U42 EIF2B5-204ENST00000465218 1310 ntTSL 524.03■■□□□ 1.441e-6■■■■□ 24.5
PABPN1Q86U42 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.411e-6■■■■□ 24.5
PABPN1Q86U42 PACS2-211ENST00000551692 3453 ntTSL 223.85■■□□□ 1.411e-6■■■■□ 24.5
PABPN1Q86U42 ZSWIM8-214ENST00000603187 3713 ntTSL 1 (best)23.62■■□□□ 1.371e-6■■■■□ 24.5
PABPN1Q86U42 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC23.56■■□□□ 1.361e-6■■■■□ 24.5
PABPN1Q86U42 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.331e-6■■■■□ 24.5
PABPN1Q86U42 ZSWIM8-205ENST00000433366 5773 ntTSL 523.03■■□□□ 1.281e-6■■■■□ 24.5
PABPN1Q86U42 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.21e-6■■■■□ 24.5
PABPN1Q86U42 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC22.1■■□□□ 1.131e-6■■■■□ 24.5
PABPN1Q86U42 PHKG2-206ENST00000563913 1791 ntTSL 521.52■■□□□ 1.042e-6■■■■□ 24.5
PABPN1Q86U42 NAGPA-208ENST00000564397 3286 ntTSL 221.19■□□□□ 0.981e-6■■■■□ 24.5
PABPN1Q86U42 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.981e-6■■■■□ 24.5
PABPN1Q86U42 ZSWIM8-209ENST00000466568 466 ntTSL 220.88■□□□□ 0.931e-6■■■■□ 24.5
PABPN1Q86U42 ZSWIM8-202ENST00000412198 3611 ntTSL 220.32■□□□□ 0.841e-6■■■■□ 24.5
PABPN1Q86U42 EIF2B5-209ENST00000481054 3460 ntTSL 1 (best)20.23■□□□□ 0.831e-6■■■■□ 24.5
PABPN1Q86U42 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC20.22■□□□□ 0.831e-6■■■■□ 24.5
PABPN1Q86U42 SCAMP5-203ENST00000562212 3400 ntTSL 1 (best) BASIC19.92■□□□□ 0.781e-6■■■■□ 24.5
PABPN1Q86U42 ZSWIM8-212ENST00000492395 4490 ntTSL 1 (best)19.63■□□□□ 0.731e-6■■■■□ 24.5
PABPN1Q86U42 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.712e-6■■■■□ 24.5
PABPN1Q86U42 OTUB1-207ENST00000536443 553 ntTSL 319.39■□□□□ 0.691e-6■■■■□ 24.5
PABPN1Q86U42 ZSWIM8-222ENST00000604754 3369 ntTSL 1 (best)19.18■□□□□ 0.661e-6■■■■□ 24.5
PABPN1Q86U42 SCAMP5-201ENST00000361900 3427 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.471e-6■■■■□ 24.5
PABPN1Q86U42 DROSHA-217ENST00000512166 257 ntTSL 215.87■□□□□ 0.131e-6■■■■□ 24.5
PABPN1Q86U42 DROSHA-213ENST00000511778 1261 ntTSL 315.18■□□□□ 0.021e-6■■■■□ 24.5
PABPN1Q86U42 DROSHA-221ENST00000514927 567 ntTSL 214.36□□□□□ -0.111e-6■■■■□ 24.5
PABPN1Q86U42 RNF123-214ENST00000629802 207 ntTSL 5 BASIC8.67□□□□□ -1.021e-6■■■■□ 24.5
PABPN1Q86U42 ACY1-221ENST00000637199 790 ntTSL 234.33■■■■□ 3.099e-8■■■■□ 24.4
PABPN1Q86U42 SRSF5-208ENST00000554929 947 ntTSL 222.15■■□□□ 1.146e-9■■■■□ 24.4
PABPN1Q86U42 FUS-209ENST00000566605 1787 ntTSL 1 (best)44.08■■■■■ 4.655e-12■■■■□ 24.4
PABPN1Q86U42 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC43.8■■■■■ 4.65e-12■■■■□ 24.4
PABPN1Q86U42 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC43.06■■■■■ 4.485e-12■■■■□ 24.4
PABPN1Q86U42 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.045e-12■■■■□ 24.4
PABPN1Q86U42 FUS-206ENST00000487509 4920 ntTSL 221.11■□□□□ 0.975e-12■■■■□ 24.4
PABPN1Q86U42 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC45.34■■■■■ 4.853e-6■■■■□ 24.3
PABPN1Q86U42 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC40.33■■■■■ 4.053e-6■■■■□ 24.3
PABPN1Q86U42 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.383e-6■■■■□ 24.3
PABPN1Q86U42 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.311e-6■■■■□ 24.3
PABPN1Q86U42 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.921e-6■■■■□ 24.3
PABPN1Q86U42 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC48.37■■■■■ 5.331e-6■■■■□ 24.3
PABPN1Q86U42 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC46.48■■■■■ 5.031e-6■■■■□ 24.3
PABPN1Q86U42 DNPEP-204ENST00000373966 1875 ntTSL 541.58■■■■■ 4.251e-6■■■■□ 24.3
PABPN1Q86U42 DNPEP-203ENST00000373963 1657 ntTSL 540.12■■■■■ 4.011e-6■■■■□ 24.3
PABPN1Q86U42 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC39.28■■■■□ 3.881e-6■■■■□ 24.3
PABPN1Q86U42 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC38.44■■■■□ 3.741e-6■■■■□ 24.3
PABPN1Q86U42 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC36.87■■■■□ 3.491e-6■■■■□ 24.3
PABPN1Q86U42 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC34.49■■■■□ 3.111e-6■■■■□ 24.3
PABPN1Q86U42 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC33.2■■■□□ 2.911e-6■■■■□ 24.3
PABPN1Q86U42 PYCR1-213ENST00000584848 949 ntTSL 530.67■■■□□ 2.51e-6■■■■□ 24.3
PABPN1Q86U42 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.261e-6■■■■□ 24.3
PABPN1Q86U42 DNPEP-212ENST00000488051 480 ntTSL 325.36■■□□□ 1.651e-6■■■■□ 24.3
PABPN1Q86U42 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC25.29■■□□□ 1.641e-6■■■■□ 24.3
PABPN1Q86U42 DNPEP-220ENST00000523282 1662 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.431e-6■■■■□ 24.3
PABPN1Q86U42 DNPEP-214ENST00000490371 555 ntTSL 522.24■■□□□ 1.151e-6■■■■□ 24.3
PABPN1Q86U42 DNPEP-211ENST00000462779 251 ntTSL 212.35□□□□□ -0.431e-6■■■■□ 24.3
PABPN1Q86U42 PCGF3-213ENST00000620529 1899 ntBASIC29.48■■■□□ 2.311e-6■■■■□ 24.2
PABPN1Q86U42 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.591e-6■■■■□ 24.2
PABPN1Q86U42 RTEL1-206ENST00000425905 664 ntTSL 227.5■■□□□ 1.991e-7■■■■□ 24.2
PABPN1Q86U42 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.017e-7■■■■□ 24.2
PABPN1Q86U42 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.017e-7■■■■□ 24.2
PABPN1Q86U42 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC10.11□□□□□ -0.791e-6■■■■□ 24.2
PABPN1Q86U42 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.811e-6■■■■□ 24.2
PABPN1Q86U42 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC7.75□□□□□ -1.171e-6■■■■□ 24.2
PABPN1Q86U42 ATF7IP2-215ENST00000568027 3406 ntTSL 1 (best)7.44□□□□□ -1.221e-6■■■■□ 24.2
PABPN1Q86U42 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.451e-6■■■■□ 24.2
PABPN1Q86U42 HOOK2-205ENST00000586710 548 ntTSL 324.73■■□□□ 1.552e-8■■■■□ 24.2
PABPN1Q86U42 MICAL1-204ENST00000433205 754 ntTSL 528.18■■■□□ 2.19e-7■■■■□ 24.1
PABPN1Q86U42 TCIRG1-212ENST00000530802 223 ntTSL 1 (best)37.48■■■■□ 3.598e-9■■■■□ 24.1
PABPN1Q86U42 SNRNP200-207ENST00000493271 585 ntTSL 323.4■■□□□ 1.342e-8■■■■□ 24.1
PABPN1Q86U42 TCIRG1-214ENST00000533005 1655 ntTSL 540.21■■■■■ 4.031e-7■■■■□ 24.1
PABPN1Q86U42 DDX56-209ENST00000473924 385 ntTSL 524.04■■□□□ 1.441e-10■■■■□ 24.1
PABPN1Q86U42 EHMT2-205ENST00000436026 894 ntTSL 523.99■■□□□ 1.431e-6■■■■□ 24
PABPN1Q86U42 ABCA7-219ENST00000612569 876 ntTSL 335.58■■■■□ 3.295e-7■■■■□ 24
PABPN1Q86U42 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.271e-6■■■■□ 24
PABPN1Q86U42 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.231e-6■■■■□ 24
PABPN1Q86U42 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC22.35■■□□□ 1.171e-6■■■■□ 24
PABPN1Q86U42 MICAL1-205ENST00000456101 4112 ntTSL 219.77■□□□□ 0.761e-6■■■■□ 24
PABPN1Q86U42 MICAL1-206ENST00000465904 4381 ntTSL 219.74■□□□□ 0.751e-6■■■■□ 24
PABPN1Q86U42 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.855e-7■■■■□ 24
PABPN1Q86U42 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.85e-7■■■■□ 24
PABPN1Q86U42 EHMT2-206ENST00000461880 1825 ntTSL 525.33■■□□□ 1.642e-7■■■■□ 24
PABPN1Q86U42 EHMT2-210ENST00000478491 1517 ntTSL 523.43■■□□□ 1.342e-7■■■■□ 24
PABPN1Q86U42 EHMT2-212ENST00000494816 3036 ntTSL 517.31■□□□□ 0.362e-7■■■■□ 24
PABPN1Q86U42 CAPN12-205ENST00000595177 488 ntTSL 431.46■■■□□ 2.633e-7■■■■□ 23.9
PABPN1Q86U42 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC41.01■■■■■ 4.152e-6■■■■□ 23.9
PABPN1Q86U42 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC37.88■■■■□ 3.662e-6■■■■□ 23.9
PABPN1Q86U42 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.532e-6■■■■□ 23.9
PABPN1Q86U42 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC30.54■■■□□ 2.482e-6■■■■□ 23.9
PABPN1Q86U42 UNC13D-205ENST00000586147 589 ntTSL 529.18■■■□□ 2.269e-7■■■■□ 23.9
PABPN1Q86U42 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC27.78■■■□□ 2.042e-6■■■■□ 23.9
PABPN1Q86U42 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.639e-7■■■■□ 23.9
PABPN1Q86U42 ATF7IP2-205ENST00000535850 1907 ntTSL 220.34■□□□□ 0.859e-7■■■■□ 23.9
PABPN1Q86U42 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC16.92■□□□□ 0.39e-7■■■■□ 23.9
PABPN1Q86U42 SLC38A5-204ENST00000440085 910 ntTSL 326.01■■□□□ 1.751e-6■■■■□ 23.9
PABPN1Q86U42 SLC38A5-205ENST00000441948 871 ntTSL 525.96■■□□□ 1.751e-6■■■■□ 23.9
Retrieved 100 of 8,254 protein–RNA pairs in 234.5 ms