RNA–Protein interactions for RNA: ENST00000514927.6

DROSHA-221, Transcript of drosha ribonuclease III, humanhuman

TSL 2

Gene DROSHA, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHA-221ENST00000514927 AEBP2Q6ZN18 517 aaPredicted RBP27.77■■■□□ 2.04
DROSHA-221ENST00000514927 CHIC1Q5VXU3 224 aa26.15■■□□□ 1.78
DROSHA-221ENST00000514927 SENP3Q9H4L4 574 aaPredicted RBP23.95■■□□□ 1.42
DROSHA-221ENST00000514927 PHF23Q9BUL5 403 aaPredicted RBP23.47■■□□□ 1.35
DROSHA-221ENST00000514927 FOXD1Q16676 465 aa22.24■■□□□ 1.15
DROSHA-221ENST00000514927 POTEDQ86YR6 584 aa21.25■□□□□ 0.99
DROSHA-221ENST00000514927 MSH5O43196 834 aa21.15■□□□□ 0.98
DROSHA-221ENST00000514927 PIAS4Q8N2W9 510 aaPredicted RBP20.74■□□□□ 0.91
DROSHA-221ENST00000514927 PLPPR3Q6T4P5 718 aa20.69■□□□□ 0.9
DROSHA-221ENST00000514927 PPP6R1Q9UPN7 881 aa20.38■□□□□ 0.85
DROSHA-221ENST00000514927 ADRA2BP18089 450 aa20.31■□□□□ 0.84
DROSHA-221ENST00000514927 DMRT2Q9Y5R5 561 aa18.88■□□□□ 0.61
DROSHA-221ENST00000514927 SCAF1Q9H7N4 1312 aaKnown RBP18.81■□□□□ 0.6
DROSHA-221ENST00000514927 MAPK8IP2Q13387 824 aaPredicted RBP18.75■□□□□ 0.59
DROSHA-221ENST00000514927 CACNB1Q02641 598 aaPredicted RBP18.34■□□□□ 0.53
DROSHA-221ENST00000514927 DCAF8L1A6NGE4 600 aa18.09■□□□□ 0.49
DROSHA-221ENST00000514927 HOXD11P31277 338 aaPredicted RBP18.01■□□□□ 0.47
DROSHA-221ENST00000514927 PPP4R3CPQ6ZMV5 832 aa18■□□□□ 0.47
DROSHA-221ENST00000514927 RNF39Q9H2S5 420 aa17.92■□□□□ 0.46
DROSHA-221ENST00000514927 CNKSR2Q8WXI2 1034 aa17.83■□□□□ 0.44
DROSHA-221ENST00000514927 RNF216Q9NWF9 866 aaPredicted RBP17.79■□□□□ 0.44
DROSHA-221ENST00000514927 C1QBPQ07021 282 aaKnown RBP17.71■□□□□ 0.43
DROSHA-221ENST00000514927 DNAJC5BQ9UF47 199 aa17.61■□□□□ 0.41
DROSHA-221ENST00000514927 NCBP3Q53F19 620 aaKnown RBP17.3■□□□□ 0.36
DROSHA-221ENST00000514927 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.17■□□□□ 0.345e-7■□□□□ 9.5
DROSHA-221ENST00000514927 NPM3O75607 178 aaKnown RBP16.91■□□□□ 0.3
DROSHA-221ENST00000514927 U3KPZ7 1027 aaPredicted RBP16.69■□□□□ 0.26
DROSHA-221ENST00000514927 CAPN15O75808 1086 aa16.62■□□□□ 0.25
DROSHA-221ENST00000514927 DSG3P32926 999 aa16.61■□□□□ 0.25
DROSHA-221ENST00000514927 POTEHQ6S545 545 aa16.61■□□□□ 0.25
DROSHA-221ENST00000514927 SPINK5Q9NQ38 1064 aaPredicted RBP16.54■□□□□ 0.24
DROSHA-221ENST00000514927 APLP2Q06481 763 aa16.42■□□□□ 0.22
DROSHA-221ENST00000514927 ZNF219Q9P2Y4 722 aaPredicted RBP16.3■□□□□ 0.2
DROSHA-221ENST00000514927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.27■□□□□ 0.2
DROSHA-221ENST00000514927 HNRNPUL2Q1KMD3 747 aaKnown RBP16.27■□□□□ 0.2
DROSHA-221ENST00000514927 SLC4A2P04920 1241 aa16.22■□□□□ 0.19
DROSHA-221ENST00000514927 TRHP20396 242 aaPredicted RBP16.22■□□□□ 0.19
DROSHA-221ENST00000514927 KCNA4P22459 653 aa16.15■□□□□ 0.18
DROSHA-221ENST00000514927 ABCB7O75027 752 aa16.12■□□□□ 0.17
DROSHA-221ENST00000514927 SAMD1Q6SPF0 538 aaPredicted RBP16.11■□□□□ 0.17
DROSHA-221ENST00000514927 RBM42Q9BTD8 480 aaKnown RBP16.01■□□□□ 0.15
DROSHA-221ENST00000514927 MYCNP04198 464 aaPredicted RBP15.74■□□□□ 0.11
DROSHA-221ENST00000514927 CHRDL2Q6WN34 429 aa15.72■□□□□ 0.11
DROSHA-221ENST00000514927 POLA2Q14181 598 aa15.68■□□□□ 0.1
DROSHA-221ENST00000514927 ZBTB12Q9Y330 459 aaPredicted RBP15.51■□□□□ 0.07
DROSHA-221ENST00000514927 AKT1S1Q96B36 256 aa15.48■□□□□ 0.07
DROSHA-221ENST00000514927 SP7Q8TDD2 431 aaPredicted RBP15.38■□□□□ 0.05
DROSHA-221ENST00000514927 FOXD4L1Q9NU39 408 aa15.32■□□□□ 0.04
DROSHA-221ENST00000514927 REM2Q8IYK8 340 aaPredicted RBP15.27■□□□□ 0.04
DROSHA-221ENST00000514927 SLC4A1APQ9BWU0 796 aaKnown RBP15.23■□□□□ 0.03
DROSHA-221ENST00000514927 ATF5Q9Y2D1 282 aaPredicted RBP15.23■□□□□ 0.03
DROSHA-221ENST00000514927 PIP4P2Q8N4L2 257 aa15.21■□□□□ 0.03
DROSHA-221ENST00000514927 OSCARQ8IYS5 282 aa15.2■□□□□ 0.02
DROSHA-221ENST00000514927 HAX1O00165 279 aa15.09■□□□□ 0.01
DROSHA-221ENST00000514927 PITPNM1O00562 1244 aa15.09■□□□□ 0.01
DROSHA-221ENST00000514927 FXR2P51116 673 aaKnown RBP eCLIP15.08■□□□□ 07e-9■■■■■ 33.4
DROSHA-221ENST00000514927 ATXN8OSP0DMR3 200 aa14.96□□□□□ -0.01
DROSHA-221ENST00000514927 SPDYE2BA6NHP3 402 aa14.92□□□□□ -0.02
DROSHA-221ENST00000514927 SPDYE6P0CI01 402 aa14.92□□□□□ -0.02
DROSHA-221ENST00000514927 SPDYE2Q495Y8 402 aa14.92□□□□□ -0.02
DROSHA-221ENST00000514927 FBLN2P98095 1184 aa14.88□□□□□ -0.03
DROSHA-221ENST00000514927 ZBTB22O15209 634 aa14.78□□□□□ -0.04
DROSHA-221ENST00000514927 SPDYE1Q8NFV5 336 aaPredicted RBP14.77□□□□□ -0.05
DROSHA-221ENST00000514927 PRKAR2AP13861 404 aaKnown RBP14.72□□□□□ -0.05
DROSHA-221ENST00000514927 EVX2Q03828 476 aa14.72□□□□□ -0.05
DROSHA-221ENST00000514927 CLEC11AQ9Y240 323 aa14.69□□□□□ -0.06
DROSHA-221ENST00000514927 ZNF692Q9BU19 519 aaPredicted RBP14.62□□□□□ -0.07
DROSHA-221ENST00000514927 SSUH2Q9Y2M2 353 aa14.62□□□□□ -0.07
DROSHA-221ENST00000514927 C19orf67A6NJJ6 358 aa14.61□□□□□ -0.07
DROSHA-221ENST00000514927 MKRN4PQ13434 485 aaPredicted RBP14.54□□□□□ -0.08
DROSHA-221ENST00000514927 GABBR2O75899 941 aa14.48□□□□□ -0.09
DROSHA-221ENST00000514927 PRR29P0C7W0 189 aa14.43□□□□□ -0.1
DROSHA-221ENST00000514927 LHX8Q68G74 356 aa14.4□□□□□ -0.1
DROSHA-221ENST00000514927 CHADLQ6NUI6 762 aa14.38□□□□□ -0.11
DROSHA-221ENST00000514927 PABPN1Q86U42 306 aaKnown RBP eCLIP14.36□□□□□ -0.111e-6■■■■□ 24.5
DROSHA-221ENST00000514927 CLCN6P51797 869 aa14.32□□□□□ -0.12
DROSHA-221ENST00000514927 CD44P16070 742 aaKnown RBP14.24□□□□□ -0.13
DROSHA-221ENST00000514927 FARP1Q9Y4F1 1045 aaPredicted RBP14.21□□□□□ -0.13
DROSHA-221ENST00000514927 POTEIP0CG38 1075 aa14.1□□□□□ -0.15
DROSHA-221ENST00000514927 DCBLD2Q96PD2 775 aa14.07□□□□□ -0.16
DROSHA-221ENST00000514927 ZNF579Q8NAF0 562 aaKnown RBP14.03□□□□□ -0.16
DROSHA-221ENST00000514927 STAG3Q9UJ98 1225 aa14□□□□□ -0.17
DROSHA-221ENST00000514927 ZRANB1Q9UGI0 708 aa13.96□□□□□ -0.17
DROSHA-221ENST00000514927 CREBZFQ9NS37 354 aa13.89□□□□□ -0.19
DROSHA-221ENST00000514927 PAK3O75914 559 aaPredicted RBP13.87□□□□□ -0.19
DROSHA-221ENST00000514927 PLSCR2Q9NRY7 297 aa13.81□□□□□ -0.2
DROSHA-221ENST00000514927 GALR2O43603 387 aaPredicted RBP13.8□□□□□ -0.2
DROSHA-221ENST00000514927 NPM1P06748 294 aaKnown RBP eCLIP13.76□□□□□ -0.21
DROSHA-221ENST00000514927 CSRNP3Q8WYN3 585 aa13.74□□□□□ -0.21
DROSHA-221ENST00000514927 SPDYE4A6NLX3 237 aa13.72□□□□□ -0.21
DROSHA-221ENST00000514927 OTUD5Q96G74 571 aa13.71□□□□□ -0.21
DROSHA-221ENST00000514927 PHF12Q96QT6 1004 aa13.67□□□□□ -0.22
DROSHA-221ENST00000514927 POTEB2H3BUK9 544 aa13.61□□□□□ -0.23
DROSHA-221ENST00000514927 POTEMA6NI47 508 aa13.58□□□□□ -0.24
DROSHA-221ENST00000514927 MNX1P50219 401 aaPredicted RBP13.58□□□□□ -0.24
DROSHA-221ENST00000514927 C7P10643 843 aa13.55□□□□□ -0.24
DROSHA-221ENST00000514927 ASTLQ6HA08 431 aaPredicted RBP13.55□□□□□ -0.24
DROSHA-221ENST00000514927 SLC39A7Q92504 469 aa13.55□□□□□ -0.24
DROSHA-221ENST00000514927 MAMSTRQ6ZN01 415 aa13.53□□□□□ -0.24
DROSHA-221ENST00000514927 PCDH10Q9P2E7 1040 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms