Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 GPX1-201ENST00000419349 1106 ntBASIC26.74■■□□□ 1.87
LIMS2Q7Z4I7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
LIMS2Q7Z4I7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
LIMS2Q7Z4I7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
LIMS2Q7Z4I7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
LIMS2Q7Z4I7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.72■■□□□ 1.87
LIMS2Q7Z4I7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
LIMS2Q7Z4I7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
LIMS2Q7Z4I7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
LIMS2Q7Z4I7 AC022413.1-201ENST00000624602 984 ntBASIC26.71■■□□□ 1.87
LIMS2Q7Z4I7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
LIMS2Q7Z4I7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
LIMS2Q7Z4I7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
LIMS2Q7Z4I7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
LIMS2Q7Z4I7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.7■■□□□ 1.86
LIMS2Q7Z4I7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.7■■□□□ 1.86
LIMS2Q7Z4I7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
LIMS2Q7Z4I7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
LIMS2Q7Z4I7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
LIMS2Q7Z4I7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
LIMS2Q7Z4I7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.68■■□□□ 1.86
LIMS2Q7Z4I7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
LIMS2Q7Z4I7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
LIMS2Q7Z4I7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.68■■□□□ 1.86
LIMS2Q7Z4I7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.68■■□□□ 1.86
LIMS2Q7Z4I7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
LIMS2Q7Z4I7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
LIMS2Q7Z4I7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
LIMS2Q7Z4I7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
LIMS2Q7Z4I7 AC092296.2-201ENST00000589470 999 ntBASIC26.67■■□□□ 1.86
LIMS2Q7Z4I7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.67■■□□□ 1.86
LIMS2Q7Z4I7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
LIMS2Q7Z4I7 LINC01003-201ENST00000564834 1764 ntBASIC26.66■■□□□ 1.86
LIMS2Q7Z4I7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
LIMS2Q7Z4I7 AC142086.6-201ENST00000621154 1765 ntBASIC26.66■■□□□ 1.86
LIMS2Q7Z4I7 RNF126P1-201ENST00000567452 1320 ntBASIC26.65■■□□□ 1.86
LIMS2Q7Z4I7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
LIMS2Q7Z4I7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
LIMS2Q7Z4I7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
LIMS2Q7Z4I7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.64■■□□□ 1.86
LIMS2Q7Z4I7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.63■■□□□ 1.85
LIMS2Q7Z4I7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.63■■□□□ 1.85
LIMS2Q7Z4I7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
LIMS2Q7Z4I7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
LIMS2Q7Z4I7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
LIMS2Q7Z4I7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
LIMS2Q7Z4I7 AL157400.5-201ENST00000507624 621 ntBASIC26.62■■□□□ 1.85
LIMS2Q7Z4I7 AC126177.7-201ENST00000547904 679 ntBASIC26.62■■□□□ 1.85
LIMS2Q7Z4I7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
LIMS2Q7Z4I7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.61■■□□□ 1.85
LIMS2Q7Z4I7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.61■■□□□ 1.85
LIMS2Q7Z4I7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.61■■□□□ 1.85
LIMS2Q7Z4I7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
LIMS2Q7Z4I7 AL359258.2-201ENST00000564063 1566 ntBASIC26.61■■□□□ 1.85
LIMS2Q7Z4I7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.6■■□□□ 1.85
LIMS2Q7Z4I7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.6■■□□□ 1.85
LIMS2Q7Z4I7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
LIMS2Q7Z4I7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
LIMS2Q7Z4I7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.6■■□□□ 1.85
LIMS2Q7Z4I7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
LIMS2Q7Z4I7 RARRES2P2-201ENST00000394842 485 ntBASIC26.59■■□□□ 1.85
LIMS2Q7Z4I7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.59■■□□□ 1.85
LIMS2Q7Z4I7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.59■■□□□ 1.85
LIMS2Q7Z4I7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
LIMS2Q7Z4I7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
LIMS2Q7Z4I7 BX255925.1-201ENST00000566954 1854 ntBASIC26.57■■□□□ 1.84
LIMS2Q7Z4I7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
LIMS2Q7Z4I7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
LIMS2Q7Z4I7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
LIMS2Q7Z4I7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.56■■□□□ 1.84
LIMS2Q7Z4I7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
LIMS2Q7Z4I7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
LIMS2Q7Z4I7 ECEL1P2-201ENST00000461596 1295 ntBASIC26.55■■□□□ 1.84
LIMS2Q7Z4I7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LIMS2Q7Z4I7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.55■■□□□ 1.84
LIMS2Q7Z4I7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
LIMS2Q7Z4I7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.55■■□□□ 1.84
LIMS2Q7Z4I7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
LIMS2Q7Z4I7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
LIMS2Q7Z4I7 WHAMMP3-201ENST00000611636 1609 ntBASIC26.54■■□□□ 1.84
LIMS2Q7Z4I7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
LIMS2Q7Z4I7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
LIMS2Q7Z4I7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
LIMS2Q7Z4I7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
LIMS2Q7Z4I7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
LIMS2Q7Z4I7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
LIMS2Q7Z4I7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
LIMS2Q7Z4I7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
LIMS2Q7Z4I7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.52■■□□□ 1.84
LIMS2Q7Z4I7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
LIMS2Q7Z4I7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LIMS2Q7Z4I7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
LIMS2Q7Z4I7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.5■■□□□ 1.83
LIMS2Q7Z4I7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.5■■□□□ 1.83
LIMS2Q7Z4I7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
LIMS2Q7Z4I7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
LIMS2Q7Z4I7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LIMS2Q7Z4I7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.49■■□□□ 1.83
LIMS2Q7Z4I7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
LIMS2Q7Z4I7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms