Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HDDC2Q7Z4H3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
HDDC2Q7Z4H3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
HDDC2Q7Z4H3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
HDDC2Q7Z4H3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
HDDC2Q7Z4H3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HDDC2Q7Z4H3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
HDDC2Q7Z4H3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HDDC2Q7Z4H3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.41■■□□□ 1.18
HDDC2Q7Z4H3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
HDDC2Q7Z4H3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HDDC2Q7Z4H3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
HDDC2Q7Z4H3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.41■■□□□ 1.18
HDDC2Q7Z4H3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
HDDC2Q7Z4H3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
HDDC2Q7Z4H3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
HDDC2Q7Z4H3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
HDDC2Q7Z4H3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
HDDC2Q7Z4H3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.4■■□□□ 1.18
HDDC2Q7Z4H3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.4■■□□□ 1.18
HDDC2Q7Z4H3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HDDC2Q7Z4H3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HDDC2Q7Z4H3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HDDC2Q7Z4H3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HDDC2Q7Z4H3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HDDC2Q7Z4H3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HDDC2Q7Z4H3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HDDC2Q7Z4H3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
HDDC2Q7Z4H3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
HDDC2Q7Z4H3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
HDDC2Q7Z4H3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.38■■□□□ 1.17
HDDC2Q7Z4H3 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.38■■□□□ 1.17
HDDC2Q7Z4H3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HDDC2Q7Z4H3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
HDDC2Q7Z4H3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HDDC2Q7Z4H3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.36■■□□□ 1.17
HDDC2Q7Z4H3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HDDC2Q7Z4H3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.35■■□□□ 1.17
HDDC2Q7Z4H3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HDDC2Q7Z4H3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.35■■□□□ 1.17
HDDC2Q7Z4H3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HDDC2Q7Z4H3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HDDC2Q7Z4H3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
HDDC2Q7Z4H3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HDDC2Q7Z4H3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
HDDC2Q7Z4H3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
HDDC2Q7Z4H3 DUX4L13-201ENST00000554103 1267 ntBASIC22.34■■□□□ 1.17
HDDC2Q7Z4H3 DUX4L15-201ENST00000611059 1267 ntBASIC22.34■■□□□ 1.17
HDDC2Q7Z4H3 DUX4L23-201ENST00000615195 1269 ntBASIC22.34■■□□□ 1.17
HDDC2Q7Z4H3 DUX4L24-201ENST00000617576 1269 ntBASIC22.34■■□□□ 1.17
HDDC2Q7Z4H3 DUX4L22-201ENST00000618238 1269 ntBASIC22.34■■□□□ 1.17
HDDC2Q7Z4H3 DUX4L20-201ENST00000619712 1269 ntBASIC22.34■■□□□ 1.17
HDDC2Q7Z4H3 DUX4L21-201ENST00000622058 1269 ntBASIC22.34■■□□□ 1.17
HDDC2Q7Z4H3 DUX4L10-201ENST00000622460 1267 ntBASIC22.34■■□□□ 1.17
HDDC2Q7Z4H3 DUX4L25-201ENST00000624915 1269 ntBASIC22.34■■□□□ 1.17
HDDC2Q7Z4H3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.34■■□□□ 1.17
HDDC2Q7Z4H3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
HDDC2Q7Z4H3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.33■■□□□ 1.17
HDDC2Q7Z4H3 ZNRF2P2-203ENST00000454624 420 ntBASIC22.32■■□□□ 1.16
HDDC2Q7Z4H3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HDDC2Q7Z4H3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HDDC2Q7Z4H3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HDDC2Q7Z4H3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HDDC2Q7Z4H3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.31■■□□□ 1.16
HDDC2Q7Z4H3 DUX4L11-201ENST00000611504 1267 ntBASIC22.31■■□□□ 1.16
HDDC2Q7Z4H3 DUX4L12-201ENST00000614593 1267 ntBASIC22.31■■□□□ 1.16
HDDC2Q7Z4H3 DUX4L14-201ENST00000621227 1267 ntBASIC22.31■■□□□ 1.16
HDDC2Q7Z4H3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HDDC2Q7Z4H3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
HDDC2Q7Z4H3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.3■■□□□ 1.16
HDDC2Q7Z4H3 AC008813.1-201ENST00000536597 885 ntBASIC22.3■■□□□ 1.16
HDDC2Q7Z4H3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HDDC2Q7Z4H3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HDDC2Q7Z4H3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
HDDC2Q7Z4H3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HDDC2Q7Z4H3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
HDDC2Q7Z4H3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
HDDC2Q7Z4H3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.29■■□□□ 1.16
HDDC2Q7Z4H3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HDDC2Q7Z4H3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HDDC2Q7Z4H3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
HDDC2Q7Z4H3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
HDDC2Q7Z4H3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HDDC2Q7Z4H3 AL121749.1-202ENST00000609313 2153 ntBASIC22.28■■□□□ 1.16
HDDC2Q7Z4H3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.27■■□□□ 1.16
HDDC2Q7Z4H3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HDDC2Q7Z4H3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HDDC2Q7Z4H3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HDDC2Q7Z4H3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
HDDC2Q7Z4H3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
HDDC2Q7Z4H3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.26■■□□□ 1.15
HDDC2Q7Z4H3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.26■■□□□ 1.15
HDDC2Q7Z4H3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
HDDC2Q7Z4H3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HDDC2Q7Z4H3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
HDDC2Q7Z4H3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HDDC2Q7Z4H3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
HDDC2Q7Z4H3 ABHD17AP4-201ENST00000411545 909 ntBASIC22.24■■□□□ 1.15
HDDC2Q7Z4H3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.23■■□□□ 1.15
HDDC2Q7Z4H3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms