Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
PACS1Q6VY07 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PACS1Q6VY07 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PACS1Q6VY07 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.13■■□□□ 1.61
PACS1Q6VY07 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PACS1Q6VY07 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
PACS1Q6VY07 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PACS1Q6VY07 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PACS1Q6VY07 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.12■■□□□ 1.61
PACS1Q6VY07 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PACS1Q6VY07 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.12■■□□□ 1.61
PACS1Q6VY07 DUX4L11-201ENST00000611504 1267 ntBASIC25.12■■□□□ 1.61
PACS1Q6VY07 DUX4L12-201ENST00000614593 1267 ntBASIC25.12■■□□□ 1.61
PACS1Q6VY07 DUX4L14-201ENST00000621227 1267 ntBASIC25.12■■□□□ 1.61
PACS1Q6VY07 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.12■■□□□ 1.61
PACS1Q6VY07 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PACS1Q6VY07 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
PACS1Q6VY07 AC110285.7-201ENST00000624417 1536 ntBASIC25.12■■□□□ 1.61
PACS1Q6VY07 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.11■■□□□ 1.61
PACS1Q6VY07 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PACS1Q6VY07 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.11■■□□□ 1.61
PACS1Q6VY07 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
PACS1Q6VY07 DUX4L13-201ENST00000554103 1267 ntBASIC25.11■■□□□ 1.61
PACS1Q6VY07 DUX4L15-201ENST00000611059 1267 ntBASIC25.11■■□□□ 1.61
PACS1Q6VY07 DUX4L23-201ENST00000615195 1269 ntBASIC25.11■■□□□ 1.61
PACS1Q6VY07 DUX4L24-201ENST00000617576 1269 ntBASIC25.11■■□□□ 1.61
PACS1Q6VY07 DUX4L22-201ENST00000618238 1269 ntBASIC25.11■■□□□ 1.61
PACS1Q6VY07 DUX4L20-201ENST00000619712 1269 ntBASIC25.11■■□□□ 1.61
PACS1Q6VY07 DUX4L21-201ENST00000622058 1269 ntBASIC25.11■■□□□ 1.61
PACS1Q6VY07 DUX4L10-201ENST00000622460 1267 ntBASIC25.11■■□□□ 1.61
PACS1Q6VY07 DUX4L25-201ENST00000624915 1269 ntBASIC25.11■■□□□ 1.61
PACS1Q6VY07 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
PACS1Q6VY07 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PACS1Q6VY07 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PACS1Q6VY07 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PACS1Q6VY07 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
PACS1Q6VY07 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.09■■□□□ 1.61
PACS1Q6VY07 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PACS1Q6VY07 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PACS1Q6VY07 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.09■■□□□ 1.61
PACS1Q6VY07 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
PACS1Q6VY07 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PACS1Q6VY07 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PACS1Q6VY07 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.08■■□□□ 1.61
PACS1Q6VY07 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.08■■□□□ 1.61
PACS1Q6VY07 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.08■■□□□ 1.61
PACS1Q6VY07 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
PACS1Q6VY07 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.07■■□□□ 1.6
PACS1Q6VY07 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.07■■□□□ 1.6
PACS1Q6VY07 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PACS1Q6VY07 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
PACS1Q6VY07 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PACS1Q6VY07 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PACS1Q6VY07 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PACS1Q6VY07 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PACS1Q6VY07 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
PACS1Q6VY07 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PACS1Q6VY07 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.04■■□□□ 1.6
PACS1Q6VY07 AL449106.1-201ENST00000608517 1980 ntBASIC25.04■■□□□ 1.6
PACS1Q6VY07 AC135731.1-201ENST00000569415 2548 ntBASIC25.04■■□□□ 1.6
PACS1Q6VY07 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PACS1Q6VY07 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.04■■□□□ 1.6
PACS1Q6VY07 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PACS1Q6VY07 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PACS1Q6VY07 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.03■■□□□ 1.6
PACS1Q6VY07 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
PACS1Q6VY07 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.03■■□□□ 1.6
PACS1Q6VY07 AC091060.1-201ENST00000623524 1766 ntBASIC25.03■■□□□ 1.6
PACS1Q6VY07 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PACS1Q6VY07 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.02■■□□□ 1.6
PACS1Q6VY07 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
PACS1Q6VY07 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.02■■□□□ 1.6
PACS1Q6VY07 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PACS1Q6VY07 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PACS1Q6VY07 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.01■■□□□ 1.59
PACS1Q6VY07 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.01■■□□□ 1.59
PACS1Q6VY07 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.01■■□□□ 1.59
PACS1Q6VY07 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.01■■□□□ 1.59
PACS1Q6VY07 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
PACS1Q6VY07 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25■■□□□ 1.59
PACS1Q6VY07 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25■■□□□ 1.59
PACS1Q6VY07 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25■■□□□ 1.59
PACS1Q6VY07 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25■■□□□ 1.59
PACS1Q6VY07 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PACS1Q6VY07 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25■■□□□ 1.59
PACS1Q6VY07 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
PACS1Q6VY07 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PACS1Q6VY07 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PACS1Q6VY07 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PACS1Q6VY07 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PACS1Q6VY07 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PACS1Q6VY07 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PACS1Q6VY07 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.97■■□□□ 1.59
PACS1Q6VY07 MIR7108-201ENST00000614319 87 ntBASIC24.97■■□□□ 1.59
PACS1Q6VY07 CR559946.2-201ENST00000623684 991 ntBASIC24.97■■□□□ 1.59
PACS1Q6VY07 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PACS1Q6VY07 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PACS1Q6VY07 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
PACS1Q6VY07 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
PACS1Q6VY07 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms